Protein Info for GFF1452 in Xanthobacter sp. DMC5

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1659 signal peptide" amino acids 1 to 49 (49 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1659 amino acids)

>GFF1452 hypothetical protein (Xanthobacter sp. DMC5)
MFGATHRLNPVPSETKAHRRARLIRALLSGSALATALTGLLPATAAYGACVTSGPAGDPT
ALDCAGASSAAAVVTGNTITVTTADDTSITAAAPISVVVGSGLGGGDIVLNNIGGSFTAT
TDGIALISSGAISQASGTGIGATVNADGYALTLLPATNASVRVLAGANLTGGSSGVLAST
SGGNIDIAAEGGIFKGTASDGLTLIASGNITVNDFAGSATGGQNGLFAQSTTGTITIDRF
TGTAEGTGASGVFAQVTGTGDVNIRDFSGGATAGQNAIFAQSNAGKVDLSGFSGTAESTG
ANGIFTQVVTTGDISLKSFSGSATGSQNGILAFATSGTIDASGFSGTAKGTGGSGLLLST
TTGAITADNFTVGTGSGPFITGAAAGIQALSTSGAISIQNFGSSAQGGQYGIFAQTGAGS
VNFSGFSGSATGTSDYGVYGRTTSGAITADNFTGGSAGSPNIVGGANGVMLLTDTGGISV
KNFAASASGGQYGIFAQAGTSGDITVSGFSGTATGGTGAGVFVRTLGGSVTADNFSGTAS
GGQYGAFFNATGGDLSIQNFSGTAKSTAAGGFGLYGEATGTITLTTSGSASIEGTADGVF
LKQMGGKVAVKLGDTTEVKGSSVGLRVSSDAGSTGDIVVETTSGTSVSGAVGGIRIDKIG
TSGNVDVTTAGTVTSSGGAAIAAVSSVEGTTQTKIGVSGAVTGAVGGIVADATSTKGNAT
TLITTDATVKGGTGTAVKGLATSTTGDALSSFTLRGAITDSASGADASATAAGTATTSVK
VENAITVSGFGVRAVSTGAGGSAMVTTTANGAITSGAQGIDASATGTGMSVTVTTDGIVK
AGGAGILAALTGDSGTVNVTTNAKVTAGGTGIDAGLSGAGGTVTVKNTAEIDAQGSGILA
LNTGGATTVTVAGKITAGGNFGVGATSGGTGAARVDVGADITSAGTGVAAQTGGTGDVTV
TLADGNRILAGGTGIRTLAGGGGATVVTLGTGARVYADTGQGGTGNGIRADGTGTVAVGI
GAFSVVSGSGASEDEAVIRVSSGTGTTIDIGKSALVSSWTYAANGDLASAAGRVAIRADA
GSTTVTNNGTVVGRVSFSDGNDTFNNLSSNTWVTVGANSFGGGTDQVNNPGLTVTALNGA
QGETTTFTGLETFVNGSLVATDAGLLTMIDETPGQTAYNGARDVTYVSGVFVGQGNSRLG
IDAWLGGPGSTADKLVVGGLDANGNLLPAGTVATQGQTAIVINDVSTGAGGYNPKGMMVV
EVVNPNAVSYGKYGTQEASFVISSQSAGYDPRFGGVIDKGVFFYDLVTRGNDTYLVGVPD
REAYELPRLVTGAQSIWYETSGGWLDRQADLRTYLNGGNGAVVGKAPSAGSQSVTPGVWA
KAVGSWGLRDSSTTATVPGGAYTYDMGYSQDTYGFIAGADFGKTNVSASGKDAVMFGVMG
GYVTSQLGFDASPTSANYSGGTVGAYATYLNRNWFVDALFKADILSMDYTAPTLGGPAAY
GQSARATSLGFTLDTGYRAKLGATGFFEPIATLSYVSTRINNLPLVAGTLADFGSNDSLR
VGLGARVGGPVYDNASLRIEANLNARLWYEFLGDNTVTIYNPGLPLTVADDFNGAFGEIG
GGFNVFAKSNGWNGFTTASLKFGEGYAAANARGGVRYQW