Protein Info for PS417_07360 in Pseudomonas simiae WCS417
Annotation: ArtI protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 51% identical to PHEC_PSEAE: Cyclohexadienyl dehydratase (pheC) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
KEGG orthology group: None (inferred from 93% identity to pfs:PFLU1513)MetaCyc: 51% identical to arogenate dehydratase (Pseudomonas aeruginosa PAO1)
Arogenate dehydratase. [EC: 4.2.1.91]; Prephenate dehydratase. [EC: 4.2.1.91, 4.2.1.51]
Predicted SEED Role
"Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91)" in subsystem Phenylalanine and Tyrosine Branches from Chorismate (EC 4.2.1.51, EC 4.2.1.91)
MetaCyc Pathways
- superpathway of aromatic amino acid biosynthesis (18/18 steps found)
- superpathway of L-phenylalanine biosynthesis (10/10 steps found)
- superpathway of chorismate metabolism (44/59 steps found)
- L-phenylalanine biosynthesis I (3/3 steps found)
- L-phenylalanine biosynthesis III (cytosolic, plants) (2/2 steps found)
- L-phenylalanine biosynthesis II (3/4 steps found)
- superpathway of L-phenylalanine and L-tyrosine biosynthesis (3/5 steps found)
KEGG Metabolic Maps
- Biosynthesis of alkaloids derived from shikimate pathway
- Biosynthesis of phenylpropanoids
- Biosynthesis of plant hormones
- Phenylalanine, tyrosine and tryptophan biosynthesis
Isozymes
Compare fitness of predicted isozymes for: 4.2.1.51
Use Curated BLAST to search for 4.2.1.51 or 4.2.1.91
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1N7TX52 at UniProt or InterPro
Protein Sequence (257 amino acids)
>PS417_07360 ArtI protein (Pseudomonas simiae WCS417) MKAPFALCVLASLATSALADTTPSHLDQVLQRGTLTVCTTGDYKPYTSLRADGSYEGIDI TMAESLAKSLNAKIQWVPTTWKTLMPDFLAQRCDIAVGGISVSLERQKKAFFSQSLGVDG KIPLVRCADVQRYQTVDQINQPQVRVIEPAGGTNEVFARAHLGQAQIRLHDNVTIFDELL AGKADVMITDASEARYQQKLKPGLCAVNPERQMQYSEKAFLLPRDDVAWKNYVDQWLHLS QATGAYDAIVSQWLATP