Protein Info for GFF1118 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: Possible sulfatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 571 PF17425: Arylsulfotran_N" amino acids 54 to 124 (71 residues), 58.1 bits, see alignment E=8e-20 PF05935: Arylsulfotrans" amino acids 154 to 546 (393 residues), 339.9 bits, see alignment E=1.8e-105

Best Hits

KEGG orthology group: None (inferred from 100% identity to stm:STM0038)

Predicted SEED Role

"Possible sulfatase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (571 amino acids)

>GFF1118 Possible sulfatase (Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868)
MNTLTTTSVVLPAPRPAINQGIDINNEMVLNHTAIYENCLAQVTQENTVENALMLLDPYG
TAPLSAYAGVWSLEPAEIIVTVQDAAKTAMPVEHLYTLTAGANLLPVLGLVADTENRIVF
SQADTPLAVYTLITQPLPPVDSAEVVLGFPIINVTQPATDANKMAPGFYFITHFDRYNYA
LDQNGLVRWYVTQDYPSYNFVRIDNGHFLTTSEAKNTYLDMYEFDMMGRLHTFYNLDNQF
HHSIWPWDSNTIVAPSEYTSGRPDDLKTNEDGVSVVDLTTGLETAYYDMAKVLDTTRVSR
PSGTAPGEDPTVKDWLHINQSYVNETNQLLIASGRHQSAVFGVDLQTQALRFILSTHEDW
DDAYQPYLLTPVDSEGVALYDFSKQEDIDAADRDFWTWGQHNVVEIANNTPGIVEFMVFD
NGNYRSRDDSKSLLPPDNYSRIVHFVVNMNEMTVMRPFEYGKELGARGYSSCVSAKAIQQ
NGNIVVHFADCTFDENGRAISCQPGESDIIDPQAGSEAMGLLILQEIAPTEKTVLFEATM
TSGYYKNAETNGEGYRYDITSFRVYKMDLYA