Protein Info for Echvi_4524 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: L-fucose isomerase and related proteins

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

KEGG orthology group: None (inferred from 64% identity to phe:Phep_2812)

Predicted SEED Role

"putative L-fucose isomerase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G577 at UniProt or InterPro

Protein Sequence (534 amino acids)

>Echvi_4524 L-fucose isomerase and related proteins (Echinicola vietnamensis KMM 6221, DSM 17526)
MKSANRVYVVASGDLRLSANQVGWAFQDKMEELLSGVLKELGWEVERGHAYNQEKQHGFI
DSQRMGIEVFKPLDPTTPIIVAESVWQYTHHVLPGLYSHNAPILVLANWDGKSSGLVGAL
NLKGSLTKAGIAHSCLWSTDFTDSFFIEKLKEWLETGKISHDLSHVKELAEVQIPTELAD
KGRSFAHDFKQGKAIMGVFDEGCMGMYNAIIPDTYLHQLGVFKERLSQSALYAEMSRVGD
DDAYRILTWLEDEGMHFEWGKNPQTELTREQTLEQCKMYIAAVRIADEFGCDTIGIQYQQ
GLKDLVAASDLAEGLLNNVVRPPVYGKNGEELYKGKSIPHFNEVDECAGLDGLITTRLWE
ILGLPPENTLHDIRWGEDVEFGGRSEFVWVFLISGAVPPAHFIDGFKGASSERQPPMYFQ
KGGGSLKGISKPGYIVWSRIYMEDESLFCDIGIGEVVELPLGETQRRWHNTTPQWPIMNV
VLPGVSRDQMMAKHQANHIQVAYGESYESTVEAAYLKASALDALGIKVRFCGEI