Protein Info for Echvi_4029 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Thiol:disulfide interchange protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 165 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF03190: Thioredox_DsbH" amino acids 22 to 92 (71 residues), 31.8 bits, see alignment E=2.7e-11 PF00085: Thioredoxin" amino acids 34 to 87 (54 residues), 25.3 bits, see alignment E=2.6e-09 PF13899: Thioredoxin_7" amino acids 43 to 92 (50 residues), 32.6 bits, see alignment E=1.5e-11 PF13098: Thioredoxin_2" amino acids 45 to 157 (113 residues), 31.6 bits, see alignment E=3.6e-11

Best Hits

KEGG orthology group: None (inferred from 47% identity to fbc:FB2170_04710)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G5D9 at UniProt or InterPro

Protein Sequence (165 amino acids)

>Echvi_4029 Thiol:disulfide interchange protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MKTLLLPIMLLTSVLTGLHPTAHGQEKINWLTFEQLEDSLRLAPKKVFIDFYTDWCTYCK
KMDKKVFTDAAVITTINREYYAVRMDAETRDTVRFDGLDLVNHQATDKRPGIHDLALLLG
GRNGKFTPPTLILLDEAFRVIDRRFEYQHREKLLHWLQQDAALSR