Protein Info for Echvi_3596 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: conserved hypothetical phage tail region protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 142 TIGR02241: conserved hypothetical phage tail region protein" amino acids 3 to 140 (138 residues), 136 bits, see alignment E=3.8e-44 PF06841: Phage_T4_gp19" amino acids 7 to 138 (132 residues), 173.8 bits, see alignment E=7.8e-56

Best Hits

KEGG orthology group: None (inferred from 83% identity to fjo:Fjoh_3151)

Predicted SEED Role

"FIG00655828: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G2P4 at UniProt or InterPro

Protein Sequence (142 amino acids)

>Echvi_3596 conserved hypothetical phage tail region protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MSYPLSKFHFSVEWGGTKIGFTEVSGLDVETEIIEYRHGASPEYSKIKMPGMQKFSNITL
KRGTFKSDNEFYDWYNTINLNKVDRRDLTISLLNEEHEPVVTWKIKNAWPLKVQSTDLKG
DGNEVAIESMELAHEGLTIQNE