Protein Info for Echvi_3533 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: 6-phospho 3-hexuloisomerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 195 TIGR03127: 6-phospho 3-hexuloisomerase" amino acids 20 to 195 (176 residues), 204.6 bits, see alignment E=5.9e-65 PF01380: SIS" amino acids 44 to 156 (113 residues), 60.5 bits, see alignment E=1.5e-20

Best Hits

Swiss-Prot: 49% identical to PHI_MYCGS: 3-hexulose-6-phosphate isomerase (rmpB) from Mycobacterium gastri

KEGG orthology group: K08094, 6-phospho-3-hexuloisomerase [EC: 5.3.1.27] (inferred from 60% identity to zpr:ZPR_1062)

Predicted SEED Role

"6-phospho-3-hexuloisomerase" in subsystem Formaldehyde assimilation: Ribulose monophosphate pathway

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.3.1.27

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G0M7 at UniProt or InterPro

Protein Sequence (195 amino acids)

>Echvi_3533 6-phospho 3-hexuloisomerase (Echinicola vietnamensis KMM 6221, DSM 17526)
MWNESEMTTENSTISNAITRILSEHEQLFSRIQLENLDDVVQSLHDANRIFLIGAGRTGF
MIKAAAMRLMHLGYTVYVVGETNTPAISNGDLLLAASGSGTTGSIVKAAETARKSGAAVI
SFSTNQDAPLAQLAQHSVIIPAAGKQEFHTSISAQYAGSLFEQSFLILFDGLVHFLWKKS
KTSPEELWTRHANME