Protein Info for Echvi_2997 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Exopolyphosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 293 PF02541: Ppx-GppA" amino acids 27 to 282 (256 residues), 127 bits, see alignment E=5.2e-41

Best Hits

KEGG orthology group: K01524, exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC: 3.6.1.11 3.6.1.40] (inferred from 59% identity to mtt:Ftrac_3205)

Predicted SEED Role

"Exopolyphosphatase (EC 3.6.1.11)" in subsystem Phosphate metabolism (EC 3.6.1.11)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.6.1.11, 3.6.1.40

Use Curated BLAST to search for 3.6.1.11 or 3.6.1.40

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G314 at UniProt or InterPro

Protein Sequence (293 amino acids)

>Echvi_2997 Exopolyphosphatase (Echinicola vietnamensis KMM 6221, DSM 17526)
MKLAAVDIGSNAIRLQITHVTHHQEQINFKKLEYVRFPLRLGKDVFHSKKISEESKEKFI
KLMKAYKLLIDLYEVDDYMVCATSAMRESENGRAIAQEVKQDIGLKIQIIDGNREADLIN
IALWNYIDHKPYLHIDVGGGSTELNIYQNRQKIASKSFKIGSVRALDHKESPKVWKAMKT
FIQENIDKRHAITCIGTGGNINKVFELSKPRKNKRYLDFAKIQEMQAYLASFTFDERVNV
LNLNPDRADVIIPATSIYLTAMEAAHSKRMIVPDVGLKDGVMNVLYERNKNKA