Protein Info for Echvi_2992 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Uncharacterized FAD-dependent dehydrogenases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 527 PF21688: FAD-depend_C" amino acids 270 to 473 (204 residues), 233.7 bits, see alignment E=7e-73

Best Hits

KEGG orthology group: K07137, (no description) (inferred from 66% identity to mtt:Ftrac_1185)

Predicted SEED Role

"NAD(FAD)-utilizing dehydrogenase, sll0175 homolog"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G309 at UniProt or InterPro

Protein Sequence (527 amino acids)

>Echvi_2992 Uncharacterized FAD-dependent dehydrogenases (Echinicola vietnamensis KMM 6221, DSM 17526)
MRKEIELKLSPEEAFDQQQFESIVVKSLGLDVKSDNVIIRALKRSIDARGRKVKVNVTVE
IFLNETPPPRITASVDYPAISNGKTVIIVGAGPAGLFAALRVIELGGKPIVLERGKDVRT
RRRDLAAINKEHLVNPESNYCFGEGGAGTYSDGKLYTRSKKRGDVRRILEIMVAHGARED
ILVDAHPHIGTNKLPQLVSKLRESILGAGGEIFFDTKVTDFILKDGEMIGVVTAEGKRIE
GIGVILATGHSARDIFHLLHSKGVFLEAKPFALGVRVEHDQGLIDQIQYHCTSERGPYLP
ASSYALVQQTMFGGKQRGVFSFCMCPGGFIVPAATSPGELVVNGMSPSRRDSKFANSGIV
VAVELEDIPAQYHRFGPLSAMMFQADVEKAAWQSAGSTQVAPAQRLVDFVEGRTSQSLLD
TSYQPGLAPVNMAKEVLPEFISVRLQQAFKGFGQKMNGYLTNDAQIVGVESRTSSPVRIP
RDRERFEHTEVKRFYPCGEGAGYAGGIVSAAMDGERCAEKLMETYGK