Protein Info for Echvi_0984 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 233 TIGR00434: phosophoadenylyl-sulfate reductase" amino acids 26 to 231 (206 residues), 178.3 bits, see alignment E=1.9e-56 PF01507: PAPS_reduct" amino acids 33 to 207 (175 residues), 157.3 bits, see alignment E=2.1e-50 TIGR02055: adenylylsulfate reductase, thioredoxin dependent" amino acids 38 to 230 (193 residues), 257.3 bits, see alignment E=9.1e-81

Best Hits

Swiss-Prot: 50% identical to CYSH_BURCE: Thioredoxin-dependent 5'-adenylylsulfate reductase (cysH) from Burkholderia cepacia

KEGG orthology group: K00390, phosphoadenosine phosphosulfate reductase [EC: 1.8.4.8] (inferred from 64% identity to cpi:Cpin_2026)

MetaCyc: 55% identical to assimilatory adenylyl-sulfate reductase (Allochromatium vinosum)
Adenylyl-sulfate reductase (glutathione). [EC: 1.8.4.9]

Predicted SEED Role

"Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10)" in subsystem Cysteine Biosynthesis (EC 1.8.4.10, EC 1.8.4.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.8.4.10 or 1.8.4.8 or 1.8.4.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FX76 at UniProt or InterPro

Protein Sequence (233 amino acids)

>Echvi_0984 phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase (Echinicola vietnamensis KMM 6221, DSM 17526)
MKKNLLKDLSTRLDNLSISEAMAQLCELFPGKVVFSTSLGQEDQVITEIIAKHNLPVKIF
TLDTGRLFYETYDLLARTESRYKIKIKPYYPNTGSVEKLVSDIGINGFYESPENRKSCCY
VRKVEPLKRALAGNSIWITGLRAEQSNNRSGMQKLEWDEGNQIMKFNPLLDWSMDEMLQY
ISDHNIPYNPLHDKGFVSIGCAPCTRAIEPGEDPRAGRWWWEASHKECGLHIK