Protein Info for Echvi_0982 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: sulfate adenylyltransferase, large subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 419 TIGR00231: small GTP-binding protein domain" amino acids 7 to 197 (191 residues), 46.8 bits, see alignment E=2.8e-16 PF00009: GTP_EFTU" amino acids 7 to 210 (204 residues), 157.4 bits, see alignment E=4.9e-50 TIGR02034: sulfate adenylyltransferase, large subunit" amino acids 11 to 418 (408 residues), 504 bits, see alignment E=3.4e-155 PF22594: GTP-eEF1A_C" amino acids 321 to 418 (98 residues), 61 bits, see alignment E=1.9e-20

Best Hits

Swiss-Prot: 47% identical to CYSN_ALIF1: Sulfate adenylyltransferase subunit 1 (cysN) from Aliivibrio fischeri (strain ATCC 700601 / ES114)

KEGG orthology group: K00956, sulfate adenylyltransferase subunit 1 [EC: 2.7.7.4] (inferred from 66% identity to fjo:Fjoh_1503)

Predicted SEED Role

"Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)" in subsystem Cysteine Biosynthesis (EC 2.7.7.4)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.4

Use Curated BLAST to search for 2.7.7.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FW35 at UniProt or InterPro

Protein Sequence (419 amino acids)

>Echvi_0982 sulfate adenylyltransferase, large subunit (Echinicola vietnamensis KMM 6221, DSM 17526)
MSTENRKLINIATAGSVDDGKSTLIGRLLYDTKSLTTDKLEAIERNSKQKGFDYLDFSLA
TDGLVAEREQGITIDVAHIYFNTDKTNYIIADTPGHVEYTRNMVTGASTSSAAIILIDAR
KGVIEQTYRHFFINNLLRVGHVIVAVNKMDLVDYDQQAYEDIKKDFEALIEKSNYTKDQV
RFIPVSALHGDNIAGGSDKMDWYQGPSLLDYLEGLEIDESEDNSAARFPVQYVVRPKTDA
HHDFRGFAGKLYGGKLAVGDEVTVLPSFTTSKVKSINFFDQEFDEAIPGSSITITLEDEV
NVSRGDMLVKSNELPKSEKQLSATICQVNSKPLRTGAKYILQHGVNQVLAKVDSIEGLVH
TDFSGSEGTDELKLNDIGKVNFRLSKPIHFDPYQESKSNGSFILIDEGSYDTTSVGFIQ