Protein Info for Echvi_0739 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 284 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 43 to 62 (20 residues), see Phobius details amino acids 84 to 105 (22 residues), see Phobius details amino acids 111 to 132 (22 residues), see Phobius details amino acids 144 to 162 (19 residues), see Phobius details amino acids 168 to 190 (23 residues), see Phobius details amino acids 202 to 233 (32 residues), see Phobius details amino acids 236 to 257 (22 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0FWL4 at UniProt or InterPro

Protein Sequence (284 amino acids)

>Echvi_0739 hypothetical protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MFVKIHGLKKYYNYIQWLSLDVVLGACAGLYFFQHLLELSFTPVVYALMALAVWGIYTFD
HLMDARNIQGKASSARHLFHQVNFNTLLIWLVLVVITAVILAFDFIKFSHLMTFGMLLGT
VIIGNIVFMKFFGKKVSILKEITTAALYTAGITLVPMIRFTNEGIPRVFWYFAFGYFLMA
WFNLLLLAYMDYDSDSRDNMGSIVSVLGIPMTHSLLTGLMWVELVYLLGMFFVLGSFYYI
YLIIILIMFLIHVSAFLQPKRSKEAVRRQIDAAYLLPFVLFLVA