Protein Info for EX28DRAFT_2632 in Enterobacter asburiae PDN3

Annotation: Major Facilitator Superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 393 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details transmembrane" amino acids 44 to 62 (19 residues), see Phobius details amino acids 69 to 87 (19 residues), see Phobius details amino acids 93 to 112 (20 residues), see Phobius details amino acids 133 to 151 (19 residues), see Phobius details amino acids 157 to 174 (18 residues), see Phobius details amino acids 208 to 232 (25 residues), see Phobius details amino acids 244 to 264 (21 residues), see Phobius details amino acids 271 to 289 (19 residues), see Phobius details amino acids 295 to 316 (22 residues), see Phobius details amino acids 332 to 356 (25 residues), see Phobius details amino acids 362 to 383 (22 residues), see Phobius details PF07690: MFS_1" amino acids 18 to 338 (321 residues), 55.9 bits, see alignment E=1.8e-19

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (393 amino acids)

>EX28DRAFT_2632 Major Facilitator Superfamily (Enterobacter asburiae PDN3)
MTRLLLQFTYSKIIAVGLSVLIPIFLAQQIADADVFATYRAMEYVPYIVVGIIVGASIDS
WGAGIIMRWSLYLHILPLGLMVLVYNKWLPIQALYVALFIMSAVAYSVSAGTSRTAYDVL
PKEKWGDFNTRTSLFEQIVTVVIPLAMGWALTWSLQWTLFLLIGFSFGVSLITPRYEKRE
SVHQPWYSLFFVRVKEGIKAFRANRALMHLSFIILLVNAVETVPATLMVFYATHELKLSA
LDTGSIITAAGVGGIVGAWLLGFISKRPSMLLGLLVASMLINALLYFLVYELNSYPVLVI
SMFIESLSIVISAVSFRTLRQLCSDPASYGTTLGISGALVKSGIPVATLIGGYIAWRMGV
RQVYLLTAVVELVLTVPVTLWALKSHRESVYEI