Protein Info for EX28DRAFT_0559 in Enterobacter asburiae PDN3

Annotation: Cation/multidrug efflux pump

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1020 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 335 to 354 (20 residues), see Phobius details amino acids 361 to 382 (22 residues), see Phobius details amino acids 388 to 413 (26 residues), see Phobius details amino acids 433 to 452 (20 residues), see Phobius details amino acids 464 to 489 (26 residues), see Phobius details amino acids 527 to 546 (20 residues), see Phobius details amino acids 862 to 881 (20 residues), see Phobius details amino acids 888 to 907 (20 residues), see Phobius details amino acids 912 to 935 (24 residues), see Phobius details amino acids 962 to 982 (21 residues), see Phobius details amino acids 988 to 1011 (24 residues), see Phobius details PF00873: ACR_tran" amino acids 4 to 1012 (1009 residues), 560.9 bits, see alignment E=2.5e-172

Best Hits

KEGG orthology group: None (inferred from 90% identity to ent:Ent638_2568)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1020 amino acids)

>EX28DRAFT_0559 Cation/multidrug efflux pump (Enterobacter asburiae PDN3)
MDISRQFINNPVRVWLTILLLGIGGIFALLNIGRLEDPAFTIKTAVVVTHYPGASAQQVE
EEVTLPLENALQQLPYLDNVSSISSNGLSQITVNIASRYHSNELPQIWDELRRRVGDASR
LFPPGVVTPFVNDDFGDVFGFFFAISGDEFSNPELVRYAEQLRRELILIPGVAKVAIGGA
ISQQVNIDISLTKMAARGITLNQLSALLSRLNVVSSAGEITSGTESIRLHPTGEFENLDE
LADIIITPSGTGAATRLRDIATLSRGLNESPASIYHANGKKAVTMGVSFIPGVNVIDVGH
ALEAKLNQMSAEKPAGIQIDLFYDQAAEVGHSVNGFIINFLMALAIVIGVLLVFMGVRSG
IIIAFSLALNVLGTLLIMYLWGIELQRISLGALIIALSMLVDNAIVIVEGVLIARQQGSP
LLTAVNYIIRRSALPLLGATVIAILAFAPIGLSQDSTGEYCKSLFQVLLISLMLSWFSAL
TLTPVLIKWWLFKNDSAPDKTDESDPYDKRLYRAYQRLLNTLLHHKAPALIVMAALLAAS
VWGFGAVRQNFFPSSNTPIFFVDLWLPYGTDIKWTEKMTGDIEKTINGQPGVETTVSTIG
QGSMRFILTYSGQRQYSNYAQIMVRMDDQRNISALTRHVDEYIARNYPQVNASTKRVMFG
PSGDSAIEVRIKGPDPDRLRLIASQVDDILTRDPATGSVRNDWQNRSKVIRPQYVAALGR
ELGVDKQDVDNALEMNFSGSRAGLYREGSDLLPVVVRPPESERLDANHLNNVLVWSQTRQ
QYIPLSNVVSRFSLEWEDPLILRRDRSRVLTVQTDPDPLSQQTSGDILARVKPQIDALSL
PHGYSIEWGGDAENSSEAQQGLFTTLPLGYLVMFVITVLMFSSVKNAVAIWLTVPLALIG
VTPGFLLTGIPFGFMALIGLLSLSGMLIRNGIVLVEEIEQQKTQKDQHEAIVYAATSRLR
PILLTAFTTVLGLAPLLLDVFFQSMAVVIMFGLGFATILTLLVLPVIYACFHRKDEAKQQ