Protein Info for EX28DRAFT_0524 in Enterobacter asburiae PDN3

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 382 transmembrane" amino acids 9 to 27 (19 residues), see Phobius details amino acids 38 to 58 (21 residues), see Phobius details amino acids 79 to 101 (23 residues), see Phobius details amino acids 118 to 137 (20 residues), see Phobius details amino acids 146 to 179 (34 residues), see Phobius details amino acids 186 to 205 (20 residues), see Phobius details amino acids 228 to 252 (25 residues), see Phobius details amino acids 304 to 324 (21 residues), see Phobius details amino acids 335 to 353 (19 residues), see Phobius details amino acids 357 to 376 (20 residues), see Phobius details TIGR04370: oligosaccharide repeat unit polymerase" amino acids 5 to 369 (365 residues), 55.1 bits, see alignment E=3.2e-19

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (382 amino acids)

>EX28DRAFT_0524 hypothetical protein (Enterobacter asburiae PDN3)
MSIFLMSPGFVYASIWLFTIILYSLGLTTNISPLSNEMVVFLSINVVLGLIFSLPFITPG
SINRVRLDKIMPSWRATKIWLIIWCFAIIPDVVVAGGIPMIMQFRGGYNYTEFGIPTYHG
IVNMLFLFVFPSLYYHFLLSKRKIILLVILLMSIWEMLVFRRGILMSGLVEIFFLFFIYK
KFTKKMFIYTVFSVITIVLLFGAVGDIRGAENPYQYLLSPEGQFLSSLPSGFTWFYVYVT
AGLANLAYNFAHIVPVYDFTSFQDLFPSVIRNLIYSDLGFHDTMALVDDNANVSTMFEKL
MPDLGIAGSLIVVTCLLLLFSIAYKNLLKSYRYSLFPYAIAMQCAIFSGFYNLFFIQTYF
LLFIVTLVFVRIKIFTGSHPHV