Protein Info for DZA65_RS14235 in Dickeya dianthicola ME23

Annotation: NAD(P)-binding domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 434 PF00743: FMO-like" amino acids 6 to 357 (352 residues), 168 bits, see alignment E=1e-52 PF07992: Pyr_redox_2" amino acids 7 to 199 (193 residues), 29.5 bits, see alignment E=1.8e-10 PF13738: Pyr_redox_3" amino acids 10 to 205 (196 residues), 53.8 bits, see alignment E=6.4e-18 PF13450: NAD_binding_8" amino acids 10 to 45 (36 residues), 22.6 bits, see alignment 3.6e-08 PF13434: Lys_Orn_oxgnase" amino acids 85 to 317 (233 residues), 27.5 bits, see alignment E=6.2e-10

Best Hits

KEGG orthology group: None (inferred from 95% identity to dda:Dd703_1422)

MetaCyc: 62% identical to pederin precursor monooxygenase (symbiont bacterium of Paederus fuscipes)
1.14.13.-

Predicted SEED Role

No annotation

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385Y192 at UniProt or InterPro

Protein Sequence (434 amino acids)

>DZA65_RS14235 NAD(P)-binding domain-containing protein (Dickeya dianthicola ME23)
MNVQGKRVCIIGGGPYGVSLGKELNQAGIDYDLYEAESDFGGVWNADSRCGRTYPSLHLI
SPKVNTQYPDFPMPEDYPHYPSHKLMHQYVCDYAKTFGVYEKAHFNVAVTRIEPQADGWQ
VELSTGERKFYSFVLVSNGMQREARYPEPAYPGHFSGDIMHSIDYRTPERIKGKRVLIIG
AGNSGCDIAVDAVHHCSAVYHSTRRGYYYQPKFINGMPTPRWMEGLGNKFNTREETLAYI
QQVFKLAGYDGTDYGLKKPDYPLDASHPIMNSQLLYFIGHGDIQPKGEVSAFQGQTVTFE
DGSQIEVDTLIYATGYNRHFPFLDKNYLEMKQGIPDCFLHIVPKNFDNLLFVGYINSATG
LGVSARSHGLFVVDYLKAYFLQAKGLHDFSRMKKEQDPDLGQNYYIGSFRHQWEVDLWKF
LKLLAQYREVLNGR