Protein Info for DZA65_RS08210 in Dickeya dianthicola ME23

Annotation: cyclic beta 1-2 glucan synthetase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 2600 2861 transmembrane" amino acids 416 to 436 (21 residues), see Phobius details amino acids 447 to 466 (20 residues), see Phobius details amino acids 486 to 503 (18 residues), see Phobius details amino acids 825 to 842 (18 residues), see Phobius details amino acids 848 to 869 (22 residues), see Phobius details amino acids 950 to 969 (20 residues), see Phobius details amino acids 974 to 993 (20 residues), see Phobius details PF10091: Glycoamylase" amino acids 1325 to 1520 (196 residues), 62.9 bits, see alignment 5e-21 PF06165: GH94_b-supersand" amino acids 1584 to 1851 (268 residues), 295.7 bits, see alignment E=4.6e-92 amino acids 2079 to 2349 (271 residues), 306.8 bits, see alignment E=1.8e-95 PF17167: Glyco_hydro_94" amino acids 2364 to 2788 (425 residues), 376.3 bits, see alignment E=2.7e-116

Best Hits

Predicted SEED Role

"Cyclic beta-1,2-glucan synthase (EC 2.4.1.-)" (EC 2.4.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.4.1.-

Use Curated BLAST to search for 2.4.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385XWF9 at UniProt or InterPro

Protein Sequence (2861 amino acids)

>DZA65_RS08210 cyclic beta 1-2 glucan synthetase (Dickeya dianthicola ME23)
MKINIKQWLTVNKPRKSQPEKPVWADNASANDLAIKAELFSTAQMERYGQKLAHSHKLSP
MKQPYYLLRRLEDNEAVITRNCYLLNAADQASITPEGEWLLDNYYLIEEQIRMVRHHLPK
NFGKGLPVLAPPHDCPRIYDIASEAIAHGDGRWDVTSLTGYIAAYQRVIPLSLGELWALP
GMLRLAIVENLRRVSIEVANAQQERNLANSWVTRILECAENTPVDLIMVIADMARSRPPL
SSAFVAEMVRRLQGRGNMLALPLTWMEQRLAENGITTDVLIHRFNQQLAASQLSVSNSIA
GLRLLGETNWTDFAEAVSLVEQTLRQDPAGVYPNMHFDTRDSYRHSIEVLARYSRHSELE
VARHILTLAQATIAAMPGRHVGYYLIGEGRPELERQLAVNTSWIVQLRQRFNQVPLLSWL
GSLSLLTLALTTDIMLETHDQGMHWPLWLMALPLAVVISQLASHLLGEAVTRWRTPQPLP
RMDFSAGIPPEFSTMIVIPCLLARRESIDRLINSLEVCHLGNNNTNLYFALLTDFTDSPT
ESTPENRALLDWAGSQIQNLNLRYAKGSHPLLFYLLHRSPRWNPQQGVWMGYERKRGKLS
MLNSWLRQPGAQFSTVVGDEHGLPERVKYVITLDSDTVLPRDTAHKLVATLAHPLNHPVY
DPAKRRVVKGYGILQPGLAEEIPRNGQGRYAAICSNVAGNNPYSMMSSDVYQDLFGEGSF
VGKGIYDVDTFVTATHNTCPENLVLSHDLLEGCYARSGLLSEVLLYEQYPNNYLTDVARH
TRWIRGDWQLLNWLKPRVRTADGSFAKNPLSALSRWKLLDNLRRSLVAPSLWGLLFCALL
LVPNPFYWLGILAMTLLLPTMLAVTLDLVNKPARRRSWRHLILAATGAVKRLMRIGLDFA
ALPHKTGYSLFAILTTLWRLCASHRNLHQWASIDQDAGGGETSPRRFYQAMWLNVVSGLA
LIALTALIAPMRLFFALPIGALWCLAPLLLSWLSRPPPRRSPTISIGQTHFLRQTSREIW
AFFDTFTTAKDNWLPPDNYQEIPYPTLAHRTSPTNIGLALMANLTAWDFGYIPLGDVLRR
VTHTLDTLDKMAHYRGHLYNWYDTRTLAPLNPRYISSVDSGNMAAHLLTLSAGLTLSRHQ
PILNSAQMLDGLEDTLRLLETAWGRNAPTSLRQLHKHCIAAAALPPALLYAELDNMRAQC
HRLHALCSQEDSRTRRWVDHLRHQLALFCQEWSSLLGWLTSDWQAAALPSLTWLAQAKPD
AEGAPSAAAIRLARRRLNIITELEQRLNAHAHMDFTFLYDPVTSLLSVGYHSDHHKLDSS
HYDLLPSEIRLTSFLAIATNQLPLKSWFALGRLFTTIDNETALMSWSGSMFEYLMPSLVM
PTYPGSLLEAMNHSAVNRQIDWGKARGVPWGISESGYYAFDARQNYQYRAFGVPGLGLRR
GLADDMVIAPYATLMVLMVAPQKACENLVSLEKIGARGEYGFYEALDYTPSRLANGQRYA
VVRSWMVHHQGMAFQALSHLLLDAPMVDRFMSCAAFQSARLLLQERTPDAIELYSPRRHF
ESHEGALPSARYEPREFTGVGNLPPDIQLLSNTRYHLMVTQSGGGYSRWNDLALTRWRSD
ATCDDRGAFCYISDPKTGDVWSNAWQPIGTPVGQYHVIFTDAGAEFRRTEGTLSIKTQIV
VSPEDDIELRRVTLLHRGRQPRTLELTTYAEVVLASAASDLAHPAFSNLFVQTELIPDQD
AILCHRRPRSPDEPYAWLFHMMVVRGQTPEQKTSFETDRAKFLGRGRTAANALAPRQSGP
LSNTAGPVLDPIFAIRQSVVLQPGQPVTVDIVYGVADSRQHSQALLEKYRDHPIADRVFE
LAWSHSQVVLRQINANEDDATLFNRLASAVLFPGPELRAEASIISRNRRGQPGLWGWAIS
GDLPIVILNVTRDDSLAEIASLIQAHHYWRLKGLPVDLVILNDSQGGYQQELHNRIMDLI
GAVSATSQTDKPGGIFVRNGELLSAEDRLLLLSVAHILLDDRAGGLKEQLNQRIQASVAT
QPTLIPHVGLPVNQHEPWQPDTRDLLFFNGYGGFSANGREYQITLADNAPTPAPWSNVLA
NAQFGTVISEAGQAYTWYENAHEYRLTPWENDPVSDGSGEAFYLRDEESGAVWSPTSLPV
RGSGHYLTRHGFGYSVFAHRETGIDSELTVLVAEHAPVKFAILTLSNNSGRTRRISATGY
VEWTLGESRAHSAMHVVTRAAAVTNGCGVLAHNFYRSNGSERTAFFAVTGVHCSVTGDRR
EFLGRNGSRREPAAMTHRTLSDKTGAGLDPCAAVQSTTKLIDGDQRTFVFVLGIGQHDQQ
AESMIAQYLSEDAARTELASVHRYWHRLLDNIVVDTPDPAVNLLANGWLLYQTLASRIMA
RSGYYQSGGAFGFRDQLQDTLALSHAAPERLREQILLCASRQFIEGDVQHWWHPPLGNGV
RTRCSDDYLWLPFALCHYVETTGDADILEQQLPYLEGRPLQPGEESIYEQPTVSAVEETL
WQHGVKAIRYGLRFGRHGLPLMGTGDWNDGMNRVGLAGLGESVWLGFFLYDVLQRFARLA
EQKQDHDIVTLCRTQAARLQISLETAGWDGNWYRRGYFDHGEPLGSQTSPECQIDAIAQS
WAVLSGAGSPERCEQAMRELDQRLVDDDAGLIKLLTPPFDGHGPSPGYIQGYQPGVRENG
GQYTHGALWAVMAFAHRGDTARAWQLWSLINPINHALNAGAVERYKVEPYVMAADVYSVA
PHTGRGGWSWYTGSAGWAYRLIVEALLGVKRHGAAISVHPLLPQDWPSVSLRYQHGNSHY
QITVTRGDGDYCVTLDDNALPDDRIPLVDDGQPHKVDIVQR