Protein Info for DZA65_RS07475 in Dickeya dianthicola ME23
Annotation: phosphonopyruvate decarboxylase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"Phosphonopyruvate decarboxylase (EC 4.1.1.82)" (EC 4.1.1.82)
MetaCyc Pathways
- 2-aminoethylphosphonate biosynthesis (3/3 steps found)
- methylphosphonate biosynthesis (2/4 steps found)
- fosfomycin biosynthesis (2/7 steps found)
- dehydrophos biosynthesis (3/13 steps found)
- rhizocticin A and B biosynthesis (2/12 steps found)
- phosalacine biosynthesis (4/25 steps found)
- phosphinothricin tripeptide biosynthesis (4/25 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 4.1.1.82
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A3A4CD72 at UniProt or InterPro
Protein Sequence (372 amino acids)
>DZA65_RS07475 phosphonopyruvate decarboxylase (Dickeya dianthicola ME23) MENALHFTRQLKQAGFNFFSGVPCSFLTQVINQAIADPELDYVPATSEGEAVALAAGAWL AGKQAVVMCQNSGLGNMVNPLTSLNAAFDIPVLLVVTHRGKPGIKDEPQHRLMGKITPEL LALLGIPATVLPADATAMREVIAHAMHLVRDEQKTAALIVEKGIFSEATPVVKETGGLPE RATVLELLLNLAGERDFLIATTGKTGRELFTLKDRVNNLYCVGSMGYASALAQGIALYAP QRTVTIIDGDGSALMHPGNMATIGHLRSSNLIHLLLNNGAYDSTGGQKTLADGVDFSLVA RGMGYTHAQYCSTLTELADAYRYAQMHDHGPVLLIVNIANGSMGELGRPTITPEQIARRL QHQIKESFFHDC