Protein Info for DZA65_RS07330 in Dickeya dianthicola ME23

Annotation: DUF3320 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1837 PF13195: DUF4011" amino acids 26 to 201 (176 residues), 143.7 bits, see alignment E=2e-45 PF13086: AAA_11" amino acids 313 to 377 (65 residues), 31.5 bits, see alignment (E = 6.5e-11) amino acids 1212 to 1252 (41 residues), 28.7 bits, see alignment (E = 4.5e-10) PF13087: AAA_12" amino acids 1286 to 1467 (182 residues), 41.2 bits, see alignment E=5.7e-14 PF18741: MTES_1575" amino acids 1515 to 1612 (98 residues), 127.2 bits, see alignment 8.8e-41 PF11784: DUF3320" amino acids 1675 to 1721 (47 residues), 55 bits, see alignment (E = 2.6e-18)

Best Hits

KEGG orthology group: None (inferred from 78% identity to eam:EAMY_2326)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385XVB1 at UniProt or InterPro

Protein Sequence (1837 amino acids)

>DZA65_RS07330 DUF3320 domain-containing protein (Dickeya dianthicola ME23)
MDEIEGSLYRSSNLTLSQKLEKARAELLDLTARNRLLNIPKSKNTKFLEIVNERSDILFK
MLFEEGKSFTFLHGREDKKSDESEEDNEVDSGSKDVVFLEEIETNHTDTKLQTKLTPKTL
QKKLLDLYYDSKTLEEEQGVNILFISLGTLKWIDPNNKENIRHAPLLLLPVELVRGKAGE
RFKIKVRDEDIISNLSLETFLSRVHQITLPDLNIDDEFSLTNYFLSIKQSISLKEGWDVL
DNEVNLGLFSYAKFMMYTDLDPDNWPSESKITDQETIKCLLETGFSASEELISDDIIIDK
VIPPGQMLHILDSDSSQTLAIHEVRNGKSLVIQGPPGTGKSQTIANIIASAVADGKKVLF
VAEKMAALEVVKRRLDQAGVGDTCIELHSNKTNKRAFLEELKRVWELGSPRGEFPDTLIS
NLTESRDILNAHPKRIHKIFRPSGLTPYEVMAQLIRLRRSGHNPNDYSLEGFELWTNDDF
EKRHSLIKELIERISDIGTPDLHSWNGIHRTEILPSEVERLVAALDNLGADFENTIQECS
NISKAISDDFSIRAVHDLQELIRIAELINLAPGLSPDSLTSTVWDSSQENIKSLINEGVL
YQKLFNEVAKKIYPEKFHTEITNLVDGYRELPRDFNIKAFSATYKLKSLTRKLLKEASRL
QQELGSRIGFANINEIECLIELGESIAIAPNVSPEAFIATVWEGGIDKASNLVSDIKQLS
ILKQQVNSSFNEKAWETDVENARNCLKDKAGIFKILNSEWRRSKKLSLSLLRDNSLTVPQ
QIEKLDILLKAKKLKNSIFTLSDFGQSAFGSDWRGEDSDSDLLKSLVEWMRTLRGINSEA
RLIASRLVNKDDLIYQVSQIKKLTDEVLSESRVLWDSFGSSPEDYFDSCYSVKSVPLEFL
KDKSDSLSAIDSTYNEVFVNSESLVPDRIELVSLLISAQTKFKVIHSYDEIGKSVFSPLW
FKDKSDWSELIEAYSWIEANPNLRVLAAKIEDKEGLVNKSKTLNEFINGHFEKLTLIIKS
LSSSYQDIFSNSDTNTLMFNLVQEKINIWIENSEQLSKWVAWQNRVSLAREYGIYSLVSD
LNQGVLLPEDLLGTFDRTYFDSILSLMVKDEPELARFDGDLHSRRIVNFAEMDLRRIKAA
SFEVVRAHHKAIPSKVGVGPVGVLRAEMARKRGHMAIRQLMIKAGAAIQALKPVMMMSPL
SVAQFLAPGKQSFDLLVMDEASQIQPVDALGAIARSKQIVVVGDERQLPPTSFFAKMTGS
ADDQDDDDSTQVADIESILGLFVARGLPQKMLRWHYRSRHQSLIAVSNSQFYENKLYIVP
SPYTQEAGMGLRFHHVEDGVFESGSNVIEAKRVATAILEHARSYPNLSLGVATFSVTQRR
RIQDELEILRRLNPEFEDFFHAHPSEPFFVKNLENIQGDERDVIIISVGYARDPHGYMAM
RFGPLGSEGGERRLNVLISRAKRRCEVYASITEEDIVLERAKGKGVFAFKLFLQYARTGQ
LSVAERSGRSMDSVFEEQVANALQKEGYQVHPQVGIAGFFIDLAIADPDMPGRYLIGIEC
DGMTYHSSRSSRERDRLRQAVLEDHGWIIHRIWSTDWFQRPEEQLQRTLSAIQAAKKELE
SRSETSLSRSRAVPVEIVTVEREAVTEIGLESVEDSLNDSVSYVEATPDVDTRVQIHETP
IGILAKIVEQIVHIEAPIHVSEVITRVRTAWGLQRAGARIEAAVNNAIRIVTENGKITLK
DDFLTVIDSDIKIRNRQNVSSQTLRKPENISSDEISAGIIETISKSFGATADELIIAVSR
MLGFKSTSSLLRSSINDTISSLISSKRVRLENGLLTL