Protein Info for DZA65_RS05680 in Dickeya dianthicola ME23

Annotation: L-tyrosine/L-tryptophan isonitrile synthase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 587 PF05141: DIT1_PvcA" amino acids 40 to 297 (258 residues), 215 bits, see alignment E=1.5e-67 PF02668: TauD" amino acids 329 to 584 (256 residues), 112.7 bits, see alignment E=3e-36

Best Hits

KEGG orthology group: None (inferred from 94% identity to ddd:Dda3937_01912)

Predicted SEED Role

"PvcB protein, related to amino acid oxidizing enzymes"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385XV84 at UniProt or InterPro

Protein Sequence (587 amino acids)

>DZA65_RS05680 L-tyrosine/L-tryptophan isonitrile synthase family protein (Dickeya dianthicola ME23)
MPDELNETAGKIAAIVKSYLVQTQHDRFEPEGRVFLEKQISAFLHAAEPVRFVLPGFPCK
SPNIVDKSFGILPDYGDVISINRLESLAKAIQALYEPGCQVTILSDGTTFNDIVEVPDET
RKEYNQQLRALIQSPYIEWTELGDFFPEARSDDDTRKALIKSAGLPYKGMADFIKRVGNH
DELAATHDKICSYLYNDVRLNRQPQQSNEDYLNSVAEKAYQMMYRGQALSALVERAFPDA
IRLSVHQYDNDGPKFTFGFADGLATVRQPWHSVPVLSASGNVSLLGHASVDKDRHVLVTY
QGRPWVYVEAADASAGKFDYEVLKQPLFGLKIDDPQELGVEALSPAFLAFLSAQFGFVCI
KGVQFERSEQLETFCQPFGEVFQWQFGAVHVVKPEEKPSGFVHSLEKTPIHWDLSMIRLD
HEQVGGNPWFTAERFMLYCKTPPKKGEGSTTVVDGRIVMDMVGPAVVKKWEDVRITYNTP
MTYFGGKPRNYPLVYAHPKTGKKAFRYQEGSDSELQKFTVEVEGISGPESQAFISELDRL
VYDERCMIAHNWDQGDLLIIDNWLTLHGRLPMTEASRSRELWRVQVF