Protein Info for DZA65_RS05265 in Dickeya dianthicola ME23

Annotation: autotransporter serine protease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1056 signal peptide" amino acids 1 to 68 (68 residues), see Phobius details PF00082: Peptidase_S8" amino acids 116 to 369 (254 residues), 94.5 bits, see alignment E=1.2e-30 TIGR02601: autotransporter-associated beta strand repeat" amino acids 528 to 559 (32 residues), 34.9 bits, see alignment (E = 5e-13) PF12951: PATR" amino acids 529 to 558 (30 residues), 35.6 bits, see alignment (E = 1.1e-12) PF03797: Autotransporter" amino acids 787 to 1036 (250 residues), 154.7 bits, see alignment E=6e-49

Best Hits

KEGG orthology group: K12685, subtilase-type serine protease [EC: 3.4.21.-] (inferred from 92% identity to ddd:Dda3937_03393)

Predicted SEED Role

No annotation

Isozymes

Compare fitness of predicted isozymes for: 3.4.21.-

Use Curated BLAST to search for 3.4.21.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A385XUX1 at UniProt or InterPro

Protein Sequence (1056 amino acids)

>DZA65_RS05265 autotransporter serine protease (Dickeya dianthicola ME23)
MRMALNTLRFSYARKSTMLHRIAVFHRIKTDFHHRGNAQDKKRFNRRVIAVLLLAQLTGS
VLHPALAATAEDFRTREYMFNGAALDSMHVAEAYALGYSGAGVTVGIINRVGDLSGNNEF
NGKVDAGSHWVSDPSSASPHGYWVAGGIGAARNGFGMQGVAYNSNLLTLGTDNSVNDLFQ
GMADMTNRPDVKIISNSWNFLFYPDQLSSYSAAMQDLLLNTVVSAYTSAADVLASQGQLM
VMAAGNEGHLTPALFAALPTVLDNNGLQDNIANTWINVMAYDPSQPTSSAAFIATFSNLA
QGATDYSLLAPGVNVITTSTNNTFVRINGTSFSSPYVAGVGALVSQAFPYMSGKQIADVL
LSTATPLTGSSLPKAVVLANEQYDENQSLTSSAIKVYATRTGITFTDNELTTLVSSLKIN
STYSGMTDDQVRAAILSAATDQNITVMTQNDYQALFGQGVVNAFKAVQGPGLLNAKRLVN
SDLSSGTFGGNVALYSIDTKGIDSTWSNDIGQIKNTASGSALSGLDVGLRKQGAGTLYLT
GNDTFAGPTVVEGGKLIVGKVAGDAGRLAGDAWVQSGAVLGGHGAINGSVVVQNGGTLSP
GNSVGTLTVGNVRFDSGSIYEFEIDSQGNADQLVVTNNAQLAGTVKLVGRTTGHLGDRFA
LVQAGGTLTGAFDKLESVNNSLFLADALSYNPQSAFVSVVRNNVRFSDVAQTANQKSVAN
AIDNQSGTAVLSAIADLQDADSARRAFDNLNGEFYATARNALIRNSRSVRDILNSTMSGA
GKGAEPWVSSWGYDGRQDGDGAQAGMKYNGYGLLLGNGGHVGEQGTLGFAVGAEKGRITM
DDRASRGDLNAYHAGVYLSGRALALDLRSGLSYSYLTLDSQRGINVSGLNGQATGDYRAN
LAQGFVEASHRFDFFNTLSVEPYGNTAWVWLQNQSGQEGGNGAALAFEKDTTRTAFATGG
LRLKLRPLSRLPVSLYGDIGYQRRLTRDDNQVRLRFVSGGGTFTTEGLPLADNTRLMRAG
VAVDFSRNIHLSLGYQGDRATRVKDDSAQALFSMAF