Protein Info for DZA65_RS02765 in Dickeya dianthicola ME23

Annotation: ATPase AAA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 676 PF04326: SLFN_AlbA_2" amino acids 16 to 145 (130 residues), 49.8 bits, see alignment E=2.4e-17

Best Hits

KEGG orthology group: None (inferred from 82% identity to pao:Pat9b_4160)

Predicted SEED Role

"FIG01059953: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A3A4DKW5 at UniProt or InterPro

Protein Sequence (676 amino acids)

>DZA65_RS02765 ATPase AAA (Dickeya dianthicola ME23)
MPLQIKDIIDLQTLVESEQVEFKLAGGKDGKGELPKDFWPTYSAMANGRGGWVVLGVKEQ
AGKFTPVGVIDPEKIKTDLFNQLNDRDRVSVNVLKSENDVQQVSLQGTDVLAIHIPQAMR
KQKPVHLKKSPFGNTYQRLHEGDRLCDDITVKRMLAEQIHDSRDNEVLSEHYTFQDDIDL
DSLKVYRNLLSANNPQHPYLACEPFELFKMVGGWRKDRETGKEGITLAGVLMFGKWDAII
AAAPNYMVDYQERPEAKTELRWVDRVCPDGTWSGNLFDFYRKVYQKLVADLKVPFTLEEG
QRRTDTPVHIALREALVNTLVHADFTDRVSILIVKRPDMFGFRNPGLMRLPLEDVIVGGV
SDCRNRLLHQMFLLIGLGEKAGSGMPKIFSGWKSANWRTPKLWEKTFPAQTLLELSTASL
IPQNVLDDLHQRFGETFDLLDDFEQVIVATAAIEGWVNHERACQLTTRHSREVTLTLPRL
ESKGFLVAEGEQKSKYYTLPGVSVMTPDEVFSLGAVVSSTHNEGNSAYNEQRSTHNEGNS
TYNEQRSTHNEESSTYKAEDDQPASRDEYGRLLNRFIERPYIDDVDNLTEAFRDSLFTLA
AVPREKLRLGDKALMKSVILNVCQGQYISVAALGQILSRNPNALRQQYLKPLVEQGELKL
AFPQYKNDPKQGYSAV