Protein Info for DZA65_RS02610 in Dickeya dianthicola ME23
Annotation: FAD-dependent urate hydroxylase HpxO
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 73% identical to HPXO_KLEP7: FAD-dependent urate hydroxylase (hpxO) from Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
KEGG orthology group: None (inferred from 84% identity to dze:Dd1591_3565)MetaCyc: 73% identical to FAD-dependent urate hydroxylase (Klebsiella pneumoniae)
RXN-11186 [EC: 1.14.13.113]
Predicted SEED Role
"Salicylate hydroxylase (EC 1.14.13.1)" in subsystem Salicylate and gentisate catabolism or Salicylate ester degradation (EC 1.14.13.1)
MetaCyc Pathways
- urate conversion to allantoin II (3/3 steps found)
- methylsalicylate degradation (2/2 steps found)
- salicylate degradation I (1/1 steps found)
- superpathway of salicylate degradation (3/7 steps found)
- chlorosalicylate degradation (2/7 steps found)
- naphthalene degradation to acetyl-CoA (2/12 steps found)
- superpathway of aromatic compound degradation via 2-hydroxypentadienoate (7/42 steps found)
KEGG Metabolic Maps
- 1- and 2-Methylnaphthalene degradation
- Bile acid biosynthesis
- Fluorene degradation
- Naphthalene and anthracene degradation
Isozymes
No predicted isozymesUse Curated BLAST to search for 1.14.13.1 or 1.14.13.113
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A385XTL1 at UniProt or InterPro
Protein Sequence (384 amino acids)
>DZA65_RS02610 FAD-dependent urate hydroxylase HpxO (Dickeya dianthicola ME23) MKALVIGAGIGGLCAAAALKKAGIDCEVFEAVTDIKPVGAAISVWPNGVKCMRSLGMGDI LDRGGGPMHDMAYQDGRRGDTLTRFSLQPLVEQVGERPCPVARAELQGQMLDHWGRDRVQ FGKRVSQVEEQGGTVRATFTDGTAAHGDLLIAADGAHSAVRPYVLGHTPVRRYAGYVNWN GLVAIDESIAPARQWTTFVGEGKRVSLMPVANGRFYFFFDVPLPAGLAEDRHSAREDLRR YFDGWCAPVQRLIAQLEPDAINRIEIHDMDPVERLARGRVALLGDAGHSTTPDIGQGGCA AMEDAVVLGQALAGHRPVEAALRQYEHQRLDRVRDLVLKARKRCDLTHGNVWEQTQAWYQ ELRQETGDRIIAGLRDTILGGPLG