Protein Info for DZA65_RS00940 in Dickeya dianthicola ME23
Annotation: acetylglutamate kinase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 92% identical to ARGB_PECCP: Acetylglutamate kinase (argB) from Pectobacterium carotovorum subsp. carotovorum (strain PC1)
KEGG orthology group: K00930, acetylglutamate/acetylaminoadipate kinase [EC: 2.7.2.- 2.7.2.8] (inferred from 97% identity to dze:Dd1591_3918)MetaCyc: 82% identical to acetylglutamate kinase (Escherichia coli K-12 substr. MG1655)
Acetylglutamate kinase. [EC: 2.7.2.8]
Predicted SEED Role
"Acetylglutamate kinase (EC 2.7.2.8)" in subsystem Arginine Biosynthesis extended (EC 2.7.2.8)
MetaCyc Pathways
- L-arginine biosynthesis I (via L-ornithine) (9/9 steps found)
- L-arginine biosynthesis II (acetyl cycle) (9/10 steps found)
- superpathway of arginine and polyamine biosynthesis (14/17 steps found)
- L-arginine biosynthesis III (via N-acetyl-L-citrulline) (8/9 steps found)
- L-ornithine biosynthesis I (5/5 steps found)
KEGG Metabolic Maps
- Arginine and proline metabolism
- Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
- Lysine biosynthesis
- Urea cycle and metabolism of amino groups
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.7.2.- or 2.7.2.8
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A385XS46 at UniProt or InterPro
Protein Sequence (257 amino acids)
>DZA65_RS00940 acetylglutamate kinase (Dickeya dianthicola ME23) MNPLIIKLGGVLLDSEEALERLFTALVAYRQQHQRPLVIVHGGGCLVDDLMKKLSLPVVK KNGLRVTPADQIDIITGALAGSANKTLLAWAIRHGINAVGLSLADGGSTVVTQLNDELGH VGKAEAGSPALLNTLLSAGYLPVISSIGITAGGELMNVNADQAATALAQTLGADLILLSD VSGILDGKGQRIAEMTAGKAQELIAQGIITDGMIVKVNAALDAAHALGRPVDIASWRHAE QLPMLFNGVSIGTRILA