Protein Info for DDA3937_RS06760 in Dickeya dadantii 3937

Annotation: EpsG family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 308 transmembrane" amino acids 62 to 81 (20 residues), see Phobius details amino acids 89 to 124 (36 residues), see Phobius details amino acids 132 to 154 (23 residues), see Phobius details amino acids 165 to 184 (20 residues), see Phobius details amino acids 205 to 222 (18 residues), see Phobius details amino acids 234 to 250 (17 residues), see Phobius details amino acids 256 to 275 (20 residues), see Phobius details amino acids 281 to 306 (26 residues), see Phobius details PF14897: EpsG" amino acids 2 to 296 (295 residues), 159.6 bits, see alignment E=5.7e-51

Best Hits

KEGG orthology group: None (inferred from 100% identity to ddd:Dda3937_03919)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E0SFU5 at UniProt or InterPro

Protein Sequence (308 amino acids)

>DDA3937_RS06760 EpsG family protein (Dickeya dadantii 3937)
MILIPGFTFLVGDKNINRWVDHQTYENYFFLATYNNYAEIFRNGVDPVFVSLMRPFTPTT
EGFGFFLIVCAYITLTLKLMALRRSTNNFFIFMLLYSAYFLCLHDYIQIRISLAMAFVAL
GIYYSQSKRSSFLFFFVSSLIHLTSVFVIIPYLIYKYCGRTAAKFLILGSIFLPLILFSG
IIHNARLDTYISFAKYKEAHYDANPFSSQPLLQLAGVIYIYYRSKLRKEVIDSYEYFISI
IGVICFYGMLKVPVLSFRLFEMTMFFYIILLSRIFNKSKVIIVICVLFILVGLKNMFYGS
SALLIINN