Protein Info for DDA3937_RS05345 in Dickeya dadantii 3937

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 403 transmembrane" amino acids 21 to 43 (23 residues), see Phobius details amino acids 49 to 72 (24 residues), see Phobius details amino acids 82 to 101 (20 residues), see Phobius details amino acids 107 to 133 (27 residues), see Phobius details amino acids 140 to 160 (21 residues), see Phobius details amino acids 170 to 189 (20 residues), see Phobius details amino acids 210 to 232 (23 residues), see Phobius details amino acids 237 to 258 (22 residues), see Phobius details amino acids 277 to 296 (20 residues), see Phobius details amino acids 302 to 325 (24 residues), see Phobius details amino acids 339 to 362 (24 residues), see Phobius details amino acids 369 to 389 (21 residues), see Phobius details PF07690: MFS_1" amino acids 30 to 352 (323 residues), 74 bits, see alignment E=5.3e-25

Best Hits

KEGG orthology group: None (inferred from 100% identity to ddd:Dda3937_01923)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See E0SCH7 at UniProt or InterPro

Protein Sequence (403 amino acids)

>DDA3937_RS05345 MFS transporter (Dickeya dadantii 3937)
MPRCRLSESAERRRVTVCIGMTQLINWGTAFYLPGVFCAAIAADRGWSPTLAFSGATLAL
VVMGCLSPYAGWLLDRVGGRRVMTLGAASSAAGCLLMAASTGMADYFIAWVMLGVGMRLS
LYEAAFATLVALYGGEARRAISLVTLFGGISSSLFWPLGMTLLNGLGWRWGVAIYGVIML
SGLLWLRALPQPASRLSPRTEEQAQTSPSAGTQAVLPAVLYALLMALFSFLSAGISAHLL
AILTGFGVSASLGALWGVGQVCARVGDVLMGGRIPALKLSLFLGAGLPVCFLLALLGEQS
LIAVVLFVTGYGAANGLSTLVKAALPLELFGRARYSSRIGLLLTPGFFFSAAAPSVYAAL
RISIGDRGVLMFSFGVACLITLTALLLYLTRQRVVQTVPLPDD