Protein Info for CCNA_00694 in Caulobacter crescentus NA1000 Δfur

Annotation: ATP-dependent DNA helicase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 855 PF00271: Helicase_C" amino acids 170 to 271 (102 residues), 42.6 bits, see alignment E=3.3e-15

Best Hits

KEGG orthology group: None (inferred from 100% identity to ccs:CCNA_00694)

Predicted SEED Role

"ATP-DEPENDENT DNA HELICASE"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H3C6D8 at UniProt or InterPro

Protein Sequence (855 amino acids)

>CCNA_00694 ATP-dependent DNA helicase (Caulobacter crescentus NA1000 Δfur)
MSDRSTGLAPSKLTAVLGPTNTGKTHLAVERMLGHASGMIGLPLRLLAREIYDRIVKLRG
KAAVALITGEEKIVPARAAYFVCTVEAMPLGREVEFLAVDEIQLCADPERGHIFTHRLLH
ARGKFETMFLGAGTMAPLVRRLLPDAEIVSRERFSNLSYAGSKKLTRLPRRTAIVAFSTD
AVYAIAELIRRQRGGAAVVMGSLSPRTRNAQVALYQSGEVDFLVATDAIGMGLNMDVDHV
AFAGLRKFDGKRTRWLYPQEVGQIAGRAGRYTRDGTFGVTSDCEEIDEDLVEAVESHTFE
PITQAEWRNARLDFGSLPGLLRSLSETPQRGALKLSDEALDERTLRALSQQEDVIKRCKA
DRSALIRLWEVCQTPDFRKTTDDDHQRMARTLFDDLTTGRKRLPEDWVGGQFKALDRTDG
EIDSLAARLSGVRTLSYIANRPDWVANPAHWQGLTRQLEDRISDTLHEKLMARFIDRRTS
VLLKQLGERETLYAGVGQDGEVTVEGHVVGHLSGVAFTPAKGASPLEEKALRNAAQRAVG
PEIARRLGLLASEADDAFALTPDGAILWRGEVAGAVRRDLPLLSPRARLLGELGPAAVRE
RAERRLDAFLAGEVDRHLAPLRKLERALAGGELRGLPRGIAHRLLEAGGVLDKRPVDPEL
KALSQAERRTLKGLGVRIGAFSLFCPGVLKAEAIACARALNPAGWRGALTTLEKLPSPEP
GARELSASGLRAVAGFSIPVEQLEKLDALLRTAQQQGGVVLTEAALADLGWTDKQAAAVL
RALDYTPAIRAKPDQPIVWKRRGAAKLEQKPVKARPDSPFAALAKLTEPPPPPARRKKPR
RRKPAAAKAPTQAAS