Protein Info for CA264_20160 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: acriflavin resistance protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1024 transmembrane" amino acids 9 to 27 (19 residues), see Phobius details amino acids 331 to 354 (24 residues), see Phobius details amino acids 359 to 380 (22 residues), see Phobius details amino acids 387 to 405 (19 residues), see Phobius details amino acids 440 to 461 (22 residues), see Phobius details amino acids 471 to 496 (26 residues), see Phobius details amino acids 530 to 549 (20 residues), see Phobius details amino acids 857 to 875 (19 residues), see Phobius details amino acids 882 to 904 (23 residues), see Phobius details amino acids 910 to 931 (22 residues), see Phobius details amino acids 958 to 977 (20 residues), see Phobius details amino acids 989 to 1014 (26 residues), see Phobius details PF00873: ACR_tran" amino acids 5 to 1014 (1010 residues), 744.9 bits, see alignment E=1.3e-227 PF02355: SecD_SecF_C" amino acids 864 to 1005 (142 residues), 24.6 bits, see alignment E=1.6e-09

Best Hits

KEGG orthology group: None (inferred from 55% identity to neu:NE0669)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YYZ7 at UniProt or InterPro

Protein Sequence (1024 amino acids)

>CA264_20160 acriflavin resistance protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MRWLVSTSLQLRVIVVALMLVLLYAGYNRLSNTPMDVFPEFAPPYVEVQTEAPGLSTPEV
EALVTIPLENALNGTPQMQKLRSKSVLGLSSVVLYFEKGIDVMEARQHVQERLSRAAVTL
PAVARPPVMLSPLSSTSRILKVGVSSEKLSQMELTTLIRWNVRPRLMAIPGVANVAIWGQ
RDKQYQILINPERLRLHNMTMAEVQQAAAGALQLAGGGFMDTPNQRLAIANTQSINEVSE
LARVPVSTKSGNIIRLGDVADITIGNQPPIGDAIINDGPGLLLIVEKQPGANTLEVTHNV
EAALEAMKPGLPDMELDSTIFRPASFIEMSLAHLNTALLLGCLLVVLVLAFFLYDWRTAL
ISVTALPCSLVGAALVLHYTGKTLDTMVLAGLIIALGEVVDDAIIDVENIARRLRLNRLS
AVPEPAFKVVLDASMEVRSAVIYGSMIVALVLLPVFMLPGLSGAFFQPLALSYIVAILVS
LLIALTLTPALSLLLLPNAPLREKEPPAARWLKTKYRSFLPSMLAHPKRIIATLAITLSA
SAMVVPFLGEEFLPHFKEYDFLMHWVEKPGTSLEAMKRITVKVSKDLRGIEGVRNFGAHI
GRAEVADEVVGPNFTELWISVDPNVPDYDATVAEIQHTIDGYPGLFRDVLTYLRERIKEV
LTGTSASIVVRLYGPDLDRLFAKATEIGNEVKGIDGVVDLKVQQQTRVPQIQVRFKPAAA
LQFGVSPGDVTRAVSTLMRGTKVGEVYQEQKVFDVVVWGEVAIRNDINAFRNLLVDVPNG
AKVPLRDLADIQIVPAPNEITRENSSRKIDVTCNVKGRDLGSVARDIETKIATMDFEQGY
HPELLGEYAEQRESSNTLLSISLNSMIGIFLVLYADYKSFRLAGLVMGSLLFALTGCVIS
VLLSGAVLSLGSIVGFVTVLGIAARNTIMLISHYRHLELKENIPFGQELILQGAQERIMP
IIMTALTSVLALLPIIVTGNRSGQEIEFPMAVVIVGGILTSAILNLLFMPALYFHWGRKK
EAEV