Protein Info for CA264_17350 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 255 PF05117: DUF695" amino acids 9 to 141 (133 residues), 108.1 bits, see alignment E=4.5e-35 PF06877: RraB" amino acids 151 to 250 (100 residues), 80.8 bits, see alignment E=1e-26

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YW38 at UniProt or InterPro

Protein Sequence (255 amino acids)

>CA264_17350 hypothetical protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MDQTNYVSDWEFYFGNVDNMLGSIAVDLGLAKVAPLADQPHVVWVSIKIIDPRPDGLSSM
QETIVLQQIEDDLEGELHANHNATYVGRSTSNGHRKVYFYLGDITDYDKTISTVMRGHSG
YTYSFGTKEDKGWNGYFKMLFPEPEQYQSIRNRKVIDSLEEHGDNLSRERAIHHWIFFKT
EADRQAYVTGVEQEGFSVVASDYDEELEAYPFRLHIKHTDKVDWTSIDKTVLHLWRLAKQ
HNGDYDGWETSAETA