Protein Info for CA264_05845 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: ribonuclease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 481 PF13638: PIN_4" amino acids 48 to 189 (142 residues), 123.5 bits, see alignment E=1.1e-39 PF02562: PhoH" amino acids 270 to 465 (196 residues), 157.4 bits, see alignment E=5.3e-50

Best Hits

KEGG orthology group: K07175, PhoH-like ATPase (inferred from 71% identity to chu:CHU_2279)

Predicted SEED Role

"Phosphate starvation-inducible protein PhoH, predicted ATPase" in subsystem Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YQ94 at UniProt or InterPro

Protein Sequence (481 amino acids)

>CA264_05845 ribonuclease (Pontibacter actiniarum KMM 6156, DSM 19842)
MPKASQEPKAVSAATQSTRKKAGTATKPTKPAKPKEKTPQNGTGKKVFVLDTSVILYDHS
AIQNFQEHDVAIPITVLEELDNFKKGNDIKNFEAREFIRIIDKLSAEHRLQEWLPLNGKN
KGYFKVLMNYETTEVNAINIFGDKNDHRILNSALKLQQERPDCKVVLVSKDINLRLKARA
LNITSEDYETGKIQDVAGLYTGNDTIEDVPATAINELYENNVCEPGKVLQQPPQDNHFFI
LKSFKNSVLAFYNAAEQQLERVDKLSAYGVKPRNAEQAFALHALLNPQIKLISIQGVAGT
GKTLLALAGALEQRREYKQIYLARPVVPLSNKDIGYLPGDIKSKLNPYMEPLWDNLKYIQ
NQFAESSKEFQKLRDMVELEKLMITPLAYIRGRSLSNIIFIVDEAQNLTPHEVKTIISRA
GENTKIIFTGDIYQIDTPYLDSQSNGLSYLIDRAKNHPLYAHITLLKGERSELANLANEL
L