Protein Info for CA264_03030 in Pontibacter actiniarum KMM 6156, DSM 19842

Annotation: T9SS C-terminal target domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 729 PF13385: Laminin_G_3" amino acids 70 to 218 (149 residues), 86.5 bits, see alignment E=6.5e-28 amino acids 373 to 533 (161 residues), 84.3 bits, see alignment E=2.9e-27 PF02210: Laminin_G_2" amino acids 116 to 204 (89 residues), 26.8 bits, see alignment E=2e-09 PF05345: He_PIG" amino acids 238 to 317 (80 residues), 36.8 bits, see alignment E=1.3e-12 PF18962: Por_Secre_tail" amino acids 646 to 727 (82 residues), 22.6 bits, see alignment E=3e-08 TIGR04183: Por secretion system C-terminal sorting domain" amino acids 647 to 728 (82 residues), 30.5 bits, see alignment E=1.4e-11

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1X9YXN3 at UniProt or InterPro

Protein Sequence (729 amino acids)

>CA264_03030 T9SS C-terminal target domain-containing protein (Pontibacter actiniarum KMM 6156, DSM 19842)
MAAPAAVAQASCPDGLVHYFGLDENASGTYTDYASSATASCTSCPSPAAGLFSGAQAFAG
GRGGLSVAEVQHFEWGPNSSFTMELWMKASGSSSENQVFIGRDAKDSDMLWWVGMSTNGH
PQFELYDRGHGGFSIVGEDTQINDGEWHHIAVVRDGRLRLNKLYVDGYTVGTFQYDYTDN
FESSSPVNIGFLDLNNGFGYKGLLDEVMVYNRALSEAEMRQRYSNGAGSYCGPQQVKPVI
MSEAVTHGVVGQEYQYDVKAVGNPRPAFALAEAPAGMRINSTTGEIRWVPDTEGKYKVSV
TATNSAGSDRQDLTVEVKKSLGEKVGLLHHWMLHEISGTRYQDFYTPYFAASSDASRPKP
VNGVVSGGQQFDGQDDGLNVDESYNFDWESDENFSIELWLRSNGSTSGNRVLIGRDAKDS
EAHWWIGLDGEGRAGFQLLDLEWQGIFVGGSGPKLNDDKWHQIVAVRNGGSGLTELYVDG
AKVTSGTHSYSSGFASRSPVNIGYLNDGGGYHYEGILDEVKLFGRVLSAAEIADRFNSVY
DAITELVRFEGEYNGGSTFLTWETVAEANLSHFEVERAPDMETFEKLGEVEAAGNSNNPL
AYKFTDIAPLPERSYYRLKIVKEDGKYTYSNIIMVENRGPSATFFKVYPNPVIEGEVTAE
LSNLPAGEEVMFFVSDLRGRRLLQKQVQVDDYGQLVVLVPITDEYRQGIYTLTVVSSKRV
ISRKLMVRR