Protein Info for BACOVA_05420 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1125 PF02384: N6_Mtase" amino acids 423 to 570 (148 residues), 21.4 bits, see alignment E=2.8e-08 PF20473: MmeI_Mtase" amino acids 491 to 715 (225 residues), 31.4 bits, see alignment E=2.3e-11 PF07669: Eco57I" amino acids 701 to 812 (112 residues), 50.1 bits, see alignment E=6.9e-17 PF12950: TaqI_C" amino acids 920 to 1071 (152 residues), 51.8 bits, see alignment E=1.9e-17

Best Hits

KEGG orthology group: None (inferred from 69% identity to pdn:HMPREF9137_1801)

Predicted SEED Role

"putative type IIS restriction/modification enzyme"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1125 amino acids)

>BACOVA_05420 hypothetical protein (Bacteroides ovatus ATCC 8483)
MQKLFYQNHSINSKNSNMNYKEVIESKYNREAWQKLLYDIFRNKISFWNTPSAVHVSSRL
AKEALNLGKISLVDGESIAIYEVELSDKVDIERNRRGIRDMLTTDWRNMGYAGAFMFCYR
KDESILRFSYVSETWGFNKQGEYEKMSTNTKRYTYLLGEGRGCRTAIEQFGTLKNSKQTL
SDITNAFSVETLTKQFYKDLFEWYQWAIEPSSNVSFPNNTGTEDDDREDLETKVIRLITR
IMFVWFIKQKDLVPQRIFDIDYLQTILKEFDPYSQTVGNYYNAILQNLFFATLNRAIEDE
QGNKRKFATNIKKDIKTLYRYAEMFNISENDVVTLFSEVPFLNGGLFECLDKTKTIDGVE
QAYNYDGFSRNDKRFADGRYRNRAIIPNNLFFDSEKGLISILSRYNFTIEENSPEEQQVA
LDPELLGKVFENLLGAYNPETKETARNQSGSFYTPREIVNYMVDESLITYLGDTQFVRSL
FNPDFTLDREKPEEYQRVAKRLKAIKILDPACGSGAFPMGLLNRMIDVLCRISPNEKVYD
LKLAIIENCIYGSDIQSIAAQITKLRFFISLICDCEKDASKPNFGIPTLPNLETKFVAAN
SLIAKKKQASHCLFENPDIEPTKQKLIEVRHEHFSAKTANRKSTLREKDKVLREKLARLL
ADDKDFAPEDAIQLAAWNPYDQNTVAEFFDPAWMFGVSDGFDIVIGNPPYIQLQNNGGEL
AKLYEPCDYKTFAKTGDIYCLFYERGWQLLKPKGHLCYITSNKWMRAGYGEKTRGFFAKN
TNPQLLIDFAGVKIFESATVDTNILLFSKEDNKHKTLCTVTNKQNKDGVKNLSVFVQHSG
AVCDFSSSDSWVILSPIEQSIKRKIEAVGTPLKDWDIQINYGIKTGYNDAFIIDTEKREA
ILANCQTEEERKRTAELIRPILRGRDIRRYGYKWAELWIINIHNGIKGKLPRIKIEEYPA
IKAHLDLYWDKISKRTDKGDTPYNLRNCAYMEDFNKPKIVYPNMTKYMPFVYDDNAYCTN
QKCFIITGQAIAYLTAFFNSSLFKFCFRDSFPELQGGTREMSKIFFDKIPVMQVTDEMNA
RFRSAVNDIQNVYSKSKAMAIDSMIFDLYNLSEKERQVIGFVEIE