Protein Info for BACOVA_05294 in Bacteroides ovatus ATCC 8483

Annotation: TIGR01777 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 437 PF01370: Epimerase" amino acids 3 to 212 (210 residues), 66 bits, see alignment E=7.1e-22 TIGR01777: TIGR01777 family protein" amino acids 3 to 279 (277 residues), 254.1 bits, see alignment E=1e-79 PF08338: DUF1731" amino acids 240 to 278 (39 residues), 36.5 bits, see alignment 6.6e-13 PF08212: Lipocalin_2" amino acids 293 to 436 (144 residues), 161.9 bits, see alignment E=2e-51 PF00061: Lipocalin" amino acids 300 to 431 (132 residues), 32.3 bits, see alignment E=2.1e-11

Best Hits

KEGG orthology group: K07071, (no description) (inferred from 84% identity to bth:BT_4493)

Predicted SEED Role

"Cell division inhibitor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (437 amino acids)

>BACOVA_05294 TIGR01777 family protein (Bacteroides ovatus ATCC 8483)
MNIAMTGATGYIGKHLSNYLTEKGGHRIIPLGRSMFREGMSGYLIQTLTHCDVVINLAGA
PINKRWTPEYKQELFNSRIVVTNRIIRALNAVKTKPKLMISASAVGYYPSEAEVDEYTRT
RGEGFLSDLCYAWEKEAKHCPEPTRLVITRFGVVLSPDGGAMQQMLRPLQATKIATAIGP
GTQVFPWISIRDLCRAMEFFITHEETHGVYNLVAPQQISQYAFTRAMGKAYRAWTTMVAP
QRIFRILYGEAASFLTAGQRVRSTRLTEAGFHFSIPNVGRLFRGTDHSTVTSLDLHRYMG
LWYEIARYENRFEYGLVDVTATYTLRPDGMIRVENRGCKRNSPYDICKTANGHAKIPDPT
QPGKLKVSFFLSFYSDYYVLELDEENYNYALVGSSTDKYLWILSRTPQLPEEIKKKLVTA
AERRGYDTSQLKWIEQL