Protein Info for BACOVA_05122 in Bacteroides ovatus ATCC 8483

Annotation: lipid kinase, YegS/Rv2252/BmrU family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 308 transmembrane" amino acids 170 to 187 (18 residues), see Phobius details amino acids 207 to 223 (17 residues), see Phobius details amino acids 241 to 258 (18 residues), see Phobius details TIGR00147: lipid kinase, YegS/Rv2252/BmrU family" amino acids 6 to 307 (302 residues), 119.5 bits, see alignment E=6.9e-39 PF00781: DAGK_cat" amino acids 8 to 134 (127 residues), 107.8 bits, see alignment E=2.9e-35 PF19279: YegS_C" amino acids 151 to 305 (155 residues), 43.5 bits, see alignment E=2.9e-15

Best Hits

KEGG orthology group: K07029, (no description) (inferred from 96% identity to bth:BT_4322)

Predicted SEED Role

"Transcription regulator [contains diacylglycerol kinase catalytic domain]"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (308 amino acids)

>BACOVA_05122 lipid kinase, YegS/Rv2252/BmrU family (Bacteroides ovatus ATCC 8483)
MSVEPKKWGVIYNPKAGTRKVKKRWKEIKEYMDSKGVDYDYVQSEGFGSVERLAKILANN
GYRTIVIVGGDGALNDAINGIMLSDAEDKENIALGMIPNGIGNDFAKYWGLSTEYKPAVD
CIINHRLKKIDVGYCNFYDGNEHQRRYFLNAVNIGLGARIVKITDQTKRFWGVKFLSYVA
ALFSLIFERKLYRMHLRINDEHIRGRIMTVCIGSAWGWGQTPSAVPYNGWLDVSVIYRPE
FLQIISGLWMLIQGRILNHKVVKSYRTRKVKVLRAQNAAVDLDGRLLPKHFPLEVGVLPE
KTTLIIPN