Protein Info for BACOVA_04935 in Bacteroides ovatus ATCC 8483

Annotation: metallo-beta-lactamase domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 398 PF19583: ODP" amino acids 34 to 226 (193 residues), 76.2 bits, see alignment E=6.6e-25 PF00753: Lactamase_B" amino acids 34 to 208 (175 residues), 34.3 bits, see alignment E=4.9e-12 PF12724: Flavodoxin_5" amino acids 253 to 351 (99 residues), 34.5 bits, see alignment E=4.7e-12 PF00258: Flavodoxin_1" amino acids 254 to 376 (123 residues), 53.3 bits, see alignment E=7.1e-18

Best Hits

KEGG orthology group: None (inferred from 94% identity to bth:BT_4126)

Predicted SEED Role

"Alkyldihydroxyacetonephosphate synthase (EC 2.5.1.26)" (EC 2.5.1.26)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.5.1.26

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (398 amino acids)

>BACOVA_04935 metallo-beta-lactamase domain protein (Bacteroides ovatus ATCC 8483)
MESKTRIKGNVHYVGVNDRNKHRFEAMWPLPYGVSYNSYLIDDEMVALVDTVDICYFEVY
LRKIKQVIGERPINYLIINHMEPDHSGSIRLIKQHYPEIIIVGNKQTFGMIEGFYGVTGE
QYLVKDGDFLALGRHKLRFYMTPMVHWPETMMTFDETDGVLFSGDGFGCFGTVDGGFLDT
RINVDKYWGEMVRYYSNIVGKYGSSVQKALQKLGGLPISAICSTHGPVWTENIAKVIGIY
DRLSRYDADEGVVIAYGSMYGNTEQMAEAIAEELSAQGVKNIVMHNVTKSHPSYIIADIF
RYKGLIIGSPTYSNQIFPEVEALLSKILLREVKGRYLGYFGSFAWAGAAVKRLAEFAEKS
KFELIGDPVEMKQAMKDLTYTQCENLARAMADRLKKDR