Protein Info for BACOVA_03686 in Bacteroides ovatus ATCC 8483

Annotation: chain length determinant protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 802 transmembrane" amino acids 27 to 48 (22 residues), see Phobius details amino acids 506 to 528 (23 residues), see Phobius details PF02706: Wzz" amino acids 16 to 113 (98 residues), 30.2 bits, see alignment E=1.2e-10 PF13807: GNVR" amino acids 450 to 524 (75 residues), 49.7 bits, see alignment E=7e-17 TIGR01007: capsular exopolysaccharide family" amino acids 574 to 780 (207 residues), 163 bits, see alignment E=3.3e-52 PF10609: ParA" amino acids 591 to 650 (60 residues), 28.3 bits, see alignment 2.9e-10 PF13614: AAA_31" amino acids 593 to 722 (130 residues), 29.2 bits, see alignment E=2.2e-10 PF01656: CbiA" amino acids 594 to 689 (96 residues), 26.5 bits, see alignment E=1.4e-09

Best Hits

KEGG orthology group: None (inferred from 75% identity to bth:BT_0482)

Predicted SEED Role

"Tyrosine-protein kinase Wzc (EC 2.7.10.2)" in subsystem Colanic acid biosynthesis (EC 2.7.10.2)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.10.2

Use Curated BLAST to search for 2.7.10.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (802 amino acids)

>BACOVA_03686 chain length determinant protein (Bacteroides ovatus ATCC 8483)
MVEEKKEKSMEQPEEQFNIQEILFRCLVHWPWFVFSVIVCIACAWGYLRLTTPVYNISAT
VLIKDDKKGGGTSVSSELERMGLDGFVSSSGNVDNEIEVLRSKSLSGEVVNNLGLFVTYI
DEDEFPKKELYQTSPVLVSLTPQEADKLPGRMEVAMTLQPTGVMDVQMRVGDKEYRRQFE
KLPAVFPTDEGTVAFFANNDTLSAVRPESVTKERHITAFINRPFSVAKGYANSLSIAPTS
KTTSVVVISLKNTNPRRGRDFINKLLEMYNINANNDKNEVAQKTAEFIDERIGIISKELG
STEQDLENFKRTAGITDLSSEAQIALTGNAEYEKKRVENQTQINLIVDLQKYLQGNEYEV
LPANVGLQDGGLVGAISRYNEMLIERNRLLRTSTESNPAIVNLNTSIRAMRSNVQATLDA
TLKGLQITKADLDREASRYSRRISDAPTQERQFVSIARQQEIKSGLYLMLLQKREENAIT
LAATANNAQIIDAAIADDNPVSPKRMMVYLVALFLGMGIPVGIIYLIGLTKFKIEGRADI
EKLTSLPVVGDIPLADEKSGSIAVFENQNNLMSETFRNVRTNLQFMLERDKNVILVTSTI
SGEGKSFISANLAVSLSLLGKTVVIVGLDIRKPGLNKVFNIPKKEHGITQFLTNPSMNLM
DLVQPSDINRNLFILPGGAVPPNPTELLARDGLEKAIETLKTNFDYVILDTAPVGMVTDT
LLIGRIADLSVYVCRADYTRKAEFILVNELSENNKLPNLCIVINGLDFQKKKYGYYHGYG
KYGKYYGYGKRYGYGYGYGKEK