Protein Info for BACOVA_02959 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 664 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF14508: GH97_N" amino acids 27 to 296 (270 residues), 197 bits, see alignment E=5e-62 PF10566: Glyco_hydro_97" amino acids 301 to 566 (266 residues), 329.9 bits, see alignment E=2e-102 PF14509: GH97_C" amino acids 568 to 664 (97 residues), 116.7 bits, see alignment E=7e-38

Best Hits

Swiss-Prot: 87% identical to AGAL_BACTN: Retaining alpha-galactosidase (BT_1871) from Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)

KEGG orthology group: None (inferred from 87% identity to bth:BT_1871)

Predicted SEED Role

"Alpha-glucosidase (EC 3.2.1.20)" in subsystem D-Galacturonate and D-Glucuronate Utilization or Maltose and Maltodextrin Utilization (EC 3.2.1.20)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.20

Use Curated BLAST to search for 3.2.1.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (664 amino acids)

>BACOVA_02959 hypothetical protein (Bacteroides ovatus ATCC 8483)
MKKLKILLFLCVVACTLTVQAQKQFTLNSPDGKLQTTITVGDKLTYDIYCSGRQILAPSP
ISMTLDNGEVWGEKAKLSGTSGKKVDQVIPSPFYRAGELRDHYNELTLRFKKDWNVEFRA
YDDGIAYRFVSRSKKPFNVVDETVDYHFPSDMIASVPYVKTGKDGDYDSQYFNSFENTYT
TDPLSKLNKKRLMFLPLVVDAGKGVKVCITESNLENYPGLYLSAAEGENRLTGSFAPYPK
KMVQGGHNQLQMLVKEHEAYIAKVDKPRDFPWRMSIVTTSDKDLAASNLSYLLAAPSRLT
DLSWIKPGKVAWDWWNDWNLDGVDFVTGVNNPTYKAYIDFASANGIEYVILDEGWAVNLQ
ADLMQVVKEINLKELVDYAASKNVGIILWAGYYAFDRDMENVCRHYADMGVKGFKVDFMD
RDDQLMTAFNYRAAEMCAKYKLILDLHGTHKPAGMNRTYPNVLNFEGVNGLEQMKWSPAS
VDQVKYDVMLPFTRQVSGPMDYTQGAMRNASKGNYYPCNSEPMSQGTRCRQLALYVVFES
PFNMLCDTPSNYMREPESTGFIADVPTVWDESIVLDGKMGEYIVTARRSGNVWYVGGITD
WTARDIEVDCSFLGGKTYDATLFKDGANAHRIGRDYKCESIRIKNDSKLKIHLAPGGGFA
LKIK