Protein Info for BACOVA_02287 in Bacteroides ovatus ATCC 8483

Annotation: site-specific recombinase, phage integrase family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 160 PF00589: Phage_integrase" amino acids 11 to 145 (135 residues), 73.8 bits, see alignment E=7.6e-25

Best Hits

Predicted SEED Role

"mobilizable transposon, int protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (160 amino acids)

>BACOVA_02287 site-specific recombinase, phage integrase family (Bacteroides ovatus ATCC 8483)
MLAATPCEKPVIRSAALFSCLTGLRISDIIRLQWENIVKGADGGWCMHIVTKKTKTEAVL
PLSDEALALCGERTEGQVFKGLTKTILPLYLKDWIKSAGITKHITFHGFRHTYATLQLAA
GTDLYTISKMLTHSNVGTTQVYADVVNDLKRKASEQITLK