Protein Info for BACOVA_02071 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 436 PF01637: ATPase_2" amino acids 3 to 209 (207 residues), 56.5 bits, see alignment E=5.4e-19 PF13173: AAA_14" amino acids 27 to 173 (147 residues), 32.2 bits, see alignment E=1.5e-11 PF03008: DUF234" amino acids 317 to 399 (83 residues), 55 bits, see alignment E=1.4e-18

Best Hits

KEGG orthology group: None (inferred from 55% identity to tpi:TREPR_3489)

Predicted SEED Role

"archaeal ATPase, fused to C-terminal DUF234 domain"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (436 amino acids)

>BACOVA_02071 hypothetical protein (Bacteroides ovatus ATCC 8483)
MKFYDRKKEMAILYAAKKQSQTSACFTVMTGRRRIGKTALLLESVKDTRFVYIFVARKSE
VLLCAQYQPVIQETLGIRIYGEIREFAQLFELLMQHSQKENFTLIIDEFQEFLYINPSIA
SDIQRIWDQYHATSKINFIVCGSVYSMMKRIFEDRKKPLYGRLTARISLHPFTTTVIKEI
LADHAPQFTSEDLLCLYLLTGGVAKYITLLMEAKAFNKTAMINYALSEGSPFLTEGKDML
ISEFGKDYANYFSILSLIAEGKTTQREIDSIINKNTGSYLANLEDEYSLIKKVKPMFAKP
NSRATRYCLQDNFLRFWFRFIFSNNAVLEMGKNHLLIEYVEKNYEQYSGLLLEKYFRELI
AEKEEVTDVGNYWDKNGENEIDLIALNRFNKTALIGEVKRNPRKISIPALEKKGETLHKE
LNDYKITFKGFSLKDM