Protein Info for BACOVA_00889 in Bacteroides ovatus ATCC 8483

Annotation: peptidase, S9A/B/C family, catalytic domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 774 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF00930: DPPIV_N" amino acids 122 to 460 (339 residues), 143.7 bits, see alignment E=1.9e-45 PF01738: DLH" amino acids 547 to 742 (196 residues), 24.4 bits, see alignment E=5.8e-09 PF00326: Peptidase_S9" amino acids 552 to 758 (207 residues), 120.3 bits, see alignment E=2.5e-38

Best Hits

Predicted SEED Role

"dipeptidyl peptidase IV"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (774 amino acids)

>BACOVA_00889 peptidase, S9A/B/C family, catalytic domain protein (Bacteroides ovatus ATCC 8483)
MRKRILFIVLFAWSGILHAFSQQQANYELANEFQAFGLGGNFTANSLNLWPNEINGTDKF
WFEFHTTVGKDYYFVDPERRLKEPLFDKGKLASGIAQITRGVVDRNKLELSDIKFSENLA
SFSFSYKGRNYEYNRLTHQIVEKKKEKSRSLFDRYSWMKYSPDRKYLVYVKKHNLYVKGN
GEMGMDTTEVQLTTDGVRYYSYAHDGGTDEEGEVMSDICWCPDSRHLYLVREDERLLRDF
WVINSLDDRPSLTTYRYEFPGDKNVTQNELVIVDVIGRTVKKTDISKWPDQYINPLCVTK
DSKYLFFERTKRTWDEVDLCSVNLSTMEVKEIIHEVDKPYRDPHARSVAILNDGKDILFR
SERTGWGHYYHYDGNGKLKNVMTSGEWVAGQIASIDTLGRTVYLYGYGREKDIDPSYYML
YKVHIDREGVTPLSTEDGQHQVKFLKSNRYYIDTYSRVDMEPKIMLKDNKGQGILELAKP
DIELAYKAGWKKPERFVVKAADNITDLHGVMWKPADFDSTKVYPIISVVYPGPYFGQVPT
SFTLEDRCCTRLAQLGFIVIAVSHRGDTPMRGKAYHRFGYGNMRDYPLADDKYAIEQLAR
RYSFINGKKVGIYGHSGGGFMAAAAICTYPDFYKAAVSCSGNHDNNIYNRGWGECYNGVK
EVEKVVKDSLGNETKEYGYKFNVKPNTEIAKNLKGHLMLVTGDMDKNVNPAHTYRMAQAL
IEAGKDFDMLVIPGAGHGYGSADKYFEKKMYRFFAKHLLGDTRADYWGDINRNK