Protein Info for BACOVA_00761 in Bacteroides ovatus ATCC 8483

Annotation: ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1328 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details transmembrane" amino acids 765 to 785 (21 residues), see Phobius details PF07494: Reg_prop" amino acids 340 to 363 (24 residues), 19.3 bits, see alignment (E = 4.3e-07) PF07495: Y_Y_Y" amino acids 695 to 757 (63 residues), 56.2 bits, see alignment 1.2e-18 PF00512: HisKA" amino acids 800 to 863 (64 residues), 33.9 bits, see alignment 1.2e-11 PF02518: HATPase_c" amino acids 912 to 1022 (111 residues), 83.7 bits, see alignment E=5.7e-27 PF00072: Response_reg" amino acids 1065 to 1175 (111 residues), 75.7 bits, see alignment E=1.4e-24 PF12833: HTH_18" amino acids 1235 to 1313 (79 residues), 66.1 bits, see alignment 1.3e-21

Best Hits

KEGG orthology group: None (inferred from 66% identity to bth:BT_0958)

Predicted SEED Role

"DNA-binding response regulator, AraC family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1328 amino acids)

>BACOVA_00761 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (Bacteroides ovatus ATCC 8483)
MKYIVYILLFFPVWVTAQTYKYIGIEDGLSNRRIFNIQKDAQGYMWFLTNEGMDRYNGKD
IKHYKLNKEGTILDAPIRLGWLYTEPHIGIWVVGKQGRVFQYEADRDDFKMVYKLPDTSE
AISCGYLDRNDNIWICRKDTVLLYNIKDAHIVRFPNVLHSSITAIEQVDEHHFFIATETG
VRYVKLENGILETMPVETLDYFHAQVSELYFHRQLKRLFIGSFERGVFVYDMNTQEIIRP
DADLSDVNIARISPLNETELLIATEGIGVYKVNVNTCELEDYIIANYQSYNEMNGNNIND
VFVDEEKRIWLANYPTGITVIDNRYENYHWMKHAMGNAQSLINDQVQAVIEDHEGDLWFG
TSNGISLYNSKTGQWHSFLSSFNHQLKDKNHIFITLCEVAPGIIWAGGYTSGIYKINKET
LSVEYFSPYLLSHVNMRPDKYIRDIVKDSRGHIWSGGYYNLKCFDLETNSARLYPGLNSI
TSIVEKDKDNMWIGTAAGLYLLNRNTGEYQYIEMEIGITYINTLYQADNGLLYIGTNGMG
VFIYNPQDKTFEHYFSDNSALVSNRIFTILPEVDGRIMMSTENGITCFHTKEKIFRNWTR
GEGLLPAYFNAAAGTVRKNKNFVFGSTDGAIELPMNVKFPDYKFSRLVFSDFHLSYQPVY
PGVKDSPLQKSIDETDVLELAYDENTFSFEVSTINYDSPGNALYSWKLEGFYEKWTQPGA
NNLIRFTNLPPGRYILHVRAISREEHDIVFQERAMKIIITQPFWSSWWAILCYILLVIGG
FYFVLRVINLRKQKNISDEKTQFFINTAHDIRTPLTLIKAPLEELLEEETLTDNGITRTN
IALRNVEVLLRLVSNLINFERTDVYSSKMSVSEYELNTYMNEIYNSFSSYAAIRRIEYTY
ESTFSYMNVSFDKEKMDSILKNIISNSLKYTPENGKVSISVSDTNDSWKVIIKDTGIGIP
ASEQSKLFKLHFRASNAINSKVTGSGIGLMLVGKLVSLHGGKISVDSVEHQGTTIKIVFP
KKNKTSQSISDEASSKFEALAPVLPAPNVPAKTTATIDDPNLRRILVVEDNDELRSYLVS
SLSSIYNVQACANGKEALIIIKEYWPELVLSDIMMPEMRGDELCVAIKSDIEISHIPVLL
LTALGEENNILDGLSIGADEYLIKPFSVKILRANIANLLANRELLRMRYANLDIEAKSMV
PSANGTNSLDWKFISNVKKIVDENINNPEFSVNVLCESSGMSRTSFYCKLKALTGQSPTE
FIRGMRLKRATELLKEGEYAINEISDMVGFSETKYFREVFKKYYKMSPSRYAKEGGNPSA
ELEDDEED