Protein Info for BACOVA_00675 in Bacteroides ovatus ATCC 8483

Annotation: heavy metal efflux pump, CzcA family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1032 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details transmembrane" amino acids 340 to 357 (18 residues), see Phobius details amino acids 364 to 384 (21 residues), see Phobius details amino acids 390 to 409 (20 residues), see Phobius details amino acids 446 to 464 (19 residues), see Phobius details amino acids 475 to 501 (27 residues), see Phobius details amino acids 537 to 559 (23 residues), see Phobius details amino acids 865 to 882 (18 residues), see Phobius details amino acids 894 to 912 (19 residues), see Phobius details amino acids 918 to 939 (22 residues), see Phobius details amino acids 967 to 986 (20 residues), see Phobius details amino acids 1000 to 1022 (23 residues), see Phobius details TIGR00914: heavy metal efflux pump, CzcA family" amino acids 1 to 1030 (1030 residues), 840.6 bits, see alignment E=8.6e-257 PF00873: ACR_tran" amino acids 5 to 1024 (1020 residues), 904.8 bits, see alignment E=7e-276 PF03176: MMPL" amino acids 274 to 518 (245 residues), 30.1 bits, see alignment E=2.4e-11 amino acids 818 to 985 (168 residues), 21.4 bits, see alignment E=1.1e-08

Best Hits

KEGG orthology group: None (inferred from 96% identity to bth:BT_2039)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1032 amino acids)

>BACOVA_00675 heavy metal efflux pump, CzcA family (Bacteroides ovatus ATCC 8483)
MLNKIIHYSLHNRLVVVCAAILLLIAGTYTAMHTEVDVFPDLNAPTVVIMTEANGMAAEE
VEQLVTFPVETAVNGATGVRRVRSSSTNGFSVVWVEFDWGTDIYLARQIVSEKLAVVSES
LPVNVGKPTLGPQSSILGEMLIIGLTADSTSMLDLRTIADWTIRPRLLSTGGVAQVAVLG
GDIKEYQIQLDPERMRHYGISMGEVMAVTQDMNLNANGGVLYEFGNEYIVRGVLSTSKTE
QLGKAVVKTVNNFPVTLEDIANVTIGPKAPKLGTASERGKSAVLMTVTKQPATSTLELTD
KLEASLKDLQKNLPPDVKVSTDIFRQSRFIESSIGNVKKSLFEGGIFVVIVLFLFLANVR
TTLISLVTLPLSLLVSILTLHYMGLTINTMSLGGMAIAIGSLVDDAIVDVENVYKRLREN
RLKVEAERLSTLEVVFNASKEVRMPILNSTLIIVVSFVPLFFLSGMEGRMLVPLGVAFIV
ALFASTIVALTLTPVLCSYLLGSNKTNKELKEAPVARWMKGIYEKALTWVLAHKRVTLGS
TIGLFVVALGVFFTLGRSFLPSFNEGSFTINISSLPGISLEESNKMGHRAEELLMTIPEI
QTVARKTGRAELDEHALGVNVSEIEAPFELKDRSRSELVADVREKLGTITGANIEIGQPI
SHRIDAMLSGTKANIAIKLFGDDLNKMFSLGNQIKGAISDIPGVADLNVEQQIERPQLKI
QPKREMLAKFGITLPEFSEYVNVALAGKVISQVYEQGKSFDLIVKVKDDARDEIEKIRNL
MVDTNDGRKVPLSYVAEVVSAMGPNTINRENVKRKIVISANVADRDLRSVVNDIQKRIDT
SVQLPEGYHIEYGGQFESEQAASRTLALTSFISIVVIFLLLYNEFRSVKESGVILLNLPL
ALIGGVFALVITTGEVSIPAIIGFISLFGIATRNGMLLISHYNHLQKEEGLNVYDSVIQG
SLDRLNPILMTALSSALALIPLALAGDLPGNEIQSPMAKVILGGLLTSTFLNGFIVPIVY
LMMHRKKAQKSL