Protein Info for BACOVA_00670 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 259 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 99 to 124 (26 residues), see Phobius details amino acids 170 to 203 (34 residues), see Phobius details PF19762: DUF6249" amino acids 104 to 204 (101 residues), 111.7 bits, see alignment E=8e-37

Best Hits

KEGG orthology group: None (inferred from 69% identity to bth:BT_2043)

Predicted SEED Role

"FIG00403458: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (259 amino acids)

>BACOVA_00670 hypothetical protein (Bacteroides ovatus ATCC 8483)
MKNFLLALMVVLTTCTLAVAQTTVVRDSIGKVKVTVTKDNKANTNNTAVTVIGVDTADAD
SADVNANSSNVSTTHGKASFTFDSDDSDFPFHNVSAGGGILVAIIAIIAVFGFPVFILFV
IFFFRYKNRKARYRLAEQALAAGQPLPAEFIRENKTVDSRSQGIKNTFTGIGLFIFLWAI
TGEFGIGAIGLLVTFMGIGQWIIGSKQQTQDTNATRMHTGNKDEKKNPNNVRTDSFEIIP
SESEEKDKGVNEEKNDENK