Protein Info for BACOVA_00490 in Bacteroides ovatus ATCC 8483

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1179 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF14508: GH97_N" amino acids 563 to 824 (262 residues), 145.3 bits, see alignment E=3.3e-46 PF10566: Glyco_hydro_97" amino acids 830 to 1086 (257 residues), 201.3 bits, see alignment E=3.2e-63 PF14509: GH97_C" amino acids 1089 to 1178 (90 residues), 71.2 bits, see alignment 1.1e-23

Best Hits

Predicted SEED Role

"Maltodextrin glucosidase (EC 3.2.1.20)" in subsystem Maltose and Maltodextrin Utilization (EC 3.2.1.20)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.20

Use Curated BLAST to search for 3.2.1.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1179 amino acids)

>BACOVA_00490 hypothetical protein (Bacteroides ovatus ATCC 8483)
MGNKKLIQALALATFLGITTTVLAQITERPRPVSWEQLVPGARFMDRFLPMQGSRLVADS
WGAKGVKLRLADNGIESRIWSFWGGNIVKADDGKYHLMVCGWLESSPAGHMEWSRSYVFN
TVSDTPYGPFELRNMIGRGHNPEVYRLLDGRYVLYVIDGCYVTDNLNGKWQKSKLTFDSR
DRNIVEGLSNLSFARRSDGSFLMVCRGGGIWVSRDGFHFSQVSNESVYPKVDGRFEDPVV
WKDSVQYNLIVNDWYGRIAYYLRSANGIDWTTDAGEAYMPGIARHADGKKEDWFKYERPK
VLQDEYGRAVQANFAVIDTLKFADDACDNHSSKNITIPLNPGLLLHVEGNKKIDRMSRDI
RVKVSSEKHFAPYSDLDIASLRLGAPTEVDYGRGCLVKKHERVGNDLILTFDGKGNGLTS
NDFVLKLIGKKKDGSIAYGYARLPQASVHSPLLSARAPRLTADGNCRITVENFGLETAEP
STVCVEYTDGKGRGKMLGSAEVSALKPYESTEVYFKPAVSLTLGKMQELGKVSVILKQNR
KAIGRAFITPIHAPQMLQEATTLTSPNGKLTASLSIPTISTGKWGIASLAVSFAHQGQTP
TQLMSAISLGLKTNQRDFSRRVWLIAVSDERKITDDYVMITGKRSHCVNHGVERTYTFEN
DKKQLLQFTLRVYNDGVAFRYQLPQHIDATKGKTEILLSEHTTYNIPQGTKRWMQTYDPT
SYERFYPLITDGSLPNESKKFDWGYPSLIEAAQEQFVLITEAGLRRDHAASYLNNKVKPH
QYQVTYGDKSLPIKAGYTSPWRVLITGTMADIVESTLVTDVSDPSEMTSTDWINPAPASW
IYWAYNHGSKDYKIVKEYADLAVDMKWPYLLIDWEWDVMGNGGNIDDALRYCHEHKVSPL
LWYNSSTNWIGKGAPGPLYKLNTPDARRKEMTWLKEKGVAGIKVDFFKGDDVKSVNYYLD
LLEEAARQRLLITFHGATVPRGWQRTYPHLMTVEAVYGAEWYNNAKRLGPRAAAHNCTLV
FTRNVIGPMDYTPGTFSDSQHPHFTTHGHELALPILFESALQHMPDRPSVYRSLPKEVKQ
LLSQLPTAWDETRLLNGYPDHHVVMARRKGNAWYVAGINGTESAQELKMNLKQLGLEGRT
ATLMADGQTPHSFRIETLKVTASIQVSTLPRGGFVLLID