Protein Info for B158DRAFT_2160 in Kangiella aquimarina DSM 16071

Annotation: sulfite reductase (NADPH) alpha subunit (EC 1.8.1.2)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 613 TIGR01931: sulfite reductase [NADPH] flavoprotein, alpha-component" amino acids 23 to 613 (591 residues), 668.5 bits, see alignment E=4.9e-205 PF00258: Flavodoxin_1" amino acids 73 to 201 (129 residues), 98.9 bits, see alignment E=4.7e-32 PF00667: FAD_binding_1" amino acids 248 to 439 (192 residues), 97.2 bits, see alignment E=1.6e-31 PF00175: NAD_binding_1" amino acids 471 to 577 (107 residues), 64.6 bits, see alignment E=1.9e-21

Best Hits

KEGG orthology group: K00380, sulfite reductase (NADPH) flavoprotein alpha-component [EC: 1.8.1.2] (inferred from 65% identity to kko:Kkor_0726)

Predicted SEED Role

"Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2)" in subsystem Cysteine Biosynthesis (EC 1.8.1.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.8.1.2

Use Curated BLAST to search for 1.8.1.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (613 amino acids)

>B158DRAFT_2160 sulfite reductase (NADPH) alpha subunit (EC 1.8.1.2) (Kangiella aquimarina DSM 16071)
MTVKEQLLNGLSGALINTELLDSIRNLNPQQLNWLSGYCAGLLAYQSENQAETEVANLTV
SSHASQAAKPVLVLYASQTGNAQSVAEQLIDRLHSSSVTAELKSTLAVSAKELVDYSTIL
LVTSTHGEGEPPDDAVDFYDELTSKKLLSKKQLLAGIDIAVLGLGDSSYEFFCQTAKDML
DSFKKLGAQELTEIVLCDVDFEPAAKQWIDQVAAAVIAKGKELKTGKDASKIAIDSIDSI
VRNEKINYDKENPFTASIATIQRITGRGSSKETYHLEIDITGSGILYEPGDALGIIAHNR
SELVSDIIELLHLSGDTQVKYRNQQLTLIQFLTEVAELTLINKGTVQALIELTQSDALKK
RVKNNFKSYVKDHQLIDVLLIAKPKISAQHLVDILKPKKPRLYSIASSQRENPDEIHLTL
NHILIKNQNGIRYGLASHYLTQQFEEGQSVNIFVERNPKFKLPSTDSPIIMVGPGTGIAP
FRAFLQERAAKNSAGKNWLLFGNPHFNTDFLYQVEIQKYVNSGVLNKLHLAFSRDSDQKV
YVQHKLLENSAEVWQWLEQGAYFYVCGDMHKMAKDVEKVLLSIIQQQGKYSLDEAKQYFK
DLKVQQRYQRDVY