Protein Info for B158DRAFT_2108 in Kangiella aquimarina DSM 16071

Annotation: Putative lipoprotein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 612 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF04348: LppC" amino acids 47 to 605 (559 residues), 373.7 bits, see alignment E=1.8e-115 PF13458: Peripla_BP_6" amino acids 261 to 437 (177 residues), 50.4 bits, see alignment E=2.8e-17

Best Hits

KEGG orthology group: K07121, (no description) (inferred from 84% identity to kko:Kkor_0675)

Predicted SEED Role

"LppC putative lipoprotein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (612 amino acids)

>B158DRAFT_2108 Putative lipoprotein (Kangiella aquimarina DSM 16071)
MTKKRMHKNLILVFTAFFSVLMVTSCTTTSSRKSDSRAVADYDMQPAEFYLQQAEAAEEA
DRAPFLLQAAKAYVQRKQYTQAYDILNSFYPTQLPLELRKDWYLLVGEVALTQDQPFDSI
RALQTVRNPEQFSPEWQSHYYRLLADSLAANQRHADAAMTRIEAMPLFTDPDLREEQERK
IWIELMTSPTGALEITRNRADQHDELGWLDMAIIQQQFANNPAALSEAMQEWNILYPNHP
ALYYIDIKVQRESVVVDIGAPTKIGLFLPTSGRLSTVGNVILDGFMTSFYDTQMMGSEKP
EVVVYDTASEPVELLYQQALADGVEFVIGPLLKNKANDIAQYQKLPIPTLVLNRLDNTYA
PTGMFQFGLPIEDEAEQIARSAIDKGQTRAFVINADKTVGNRAVETFNDVFQRHGGTVVR
SADLSRTPDPKVAVMQMLGADQAEKRKRELQNLLNLPIESSAQISTTADFIFMIAEPEKA
RIIKPYLNYYYAYNLPVYATSNLYNGSNRRENDLNGIYFVDAPWMIPQTEEQASNKQKIT
KMFPTAGGSLGRFFALGYDSFLLIPEIGQLSALSDYSVEGLSGELTLDFYGRIVRKLAWA
KYQNGHWIPVNP