Protein Info for B158DRAFT_1335 in Kangiella aquimarina DSM 16071

Annotation: Surface lipoprotein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 242 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF04333: MlaA" amino acids 27 to 220 (194 residues), 259.6 bits, see alignment E=8.7e-82

Best Hits

KEGG orthology group: K04754, lipoprotein (inferred from 95% identity to kko:Kkor_0990)

Predicted SEED Role

"VacJ-like lipoprotein precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (242 amino acids)

>B158DRAFT_1335 Surface lipoprotein (Kangiella aquimarina DSM 16071)
MKFNRLLLVLSVLTLSACATTDSSNPKDPYEEYNRGVWEFNRAIDKAILKPTAEGYQAIT
PDPIEKGISNFFSNLGEIETIINDLLQAKFGKAGRDTGRFLINSTLGLAGFLDPATEMGL
EKEEEDFGQTLAAWGFDSGPYLMLPFIGPSTARDGIGFVVDKTALYSPYDELNDSQTEWS
LRALDLIQTRAELLPLEEQLEQALDEYSLVRDAYLQRREFLIYDGRPPIEDDCEFEEDCE
DW