Protein Info for B158DRAFT_1085 in Kangiella aquimarina DSM 16071

Annotation: CDP-diglyceride synthetase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 296 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details transmembrane" amino acids 20 to 21 (2 residues), see Phobius details amino acids 28 to 44 (17 residues), see Phobius details amino acids 52 to 72 (21 residues), see Phobius details amino acids 92 to 113 (22 residues), see Phobius details amino acids 125 to 145 (21 residues), see Phobius details amino acids 157 to 178 (22 residues), see Phobius details amino acids 199 to 218 (20 residues), see Phobius details amino acids 224 to 244 (21 residues), see Phobius details amino acids 274 to 292 (19 residues), see Phobius details PF01148: CTP_transf_1" amino acids 3 to 288 (286 residues), 211.6 bits, see alignment E=2e-66 PF01864: CarS-like" amino acids 190 to 273 (84 residues), 23 bits, see alignment E=7.1e-09

Best Hits

KEGG orthology group: K00981, phosphatidate cytidylyltransferase [EC: 2.7.7.41] (inferred from 83% identity to kko:Kkor_1907)

Predicted SEED Role

"Phosphatidate cytidylyltransferase (EC 2.7.7.41)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria (EC 2.7.7.41)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.41

Use Curated BLAST to search for 2.7.7.41

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (296 amino acids)

>B158DRAFT_1085 CDP-diglyceride synthetase (Kangiella aquimarina DSM 16071)
MLKQRIITALVLLPLALTLLFYPGLKVFSLILIPIFGIIAWEWSRLLQTNTFLKTLFIMI
VLVALGGIYYWLTQREFFEYPTIPTNWTEVHPFKLLMVSIMAWVVAFVLILLYPKAGRTW
LRGPWIRALFGLVFLAAAWLAIVLIRSTDILENHFYGGWLLLLMFVVIWGADVGAYFFGK
TIGRHKLAPVVSPNKTWEGAIGGLVTATVLSTIAAFFIDLSFSLSWFVLLAVILVVVSII
GDLFESMLKRQAGIKDSSQILPGHGGLLDRLDSTLSVAPFFIVALLIFKHGFSLSL