Protein Info for B158DRAFT_0301 in Kangiella aquimarina DSM 16071

Annotation: Hemolysins and related proteins containing CBS domains

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 392 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 39 to 66 (28 residues), see Phobius details amino acids 95 to 115 (21 residues), see Phobius details amino acids 122 to 145 (24 residues), see Phobius details amino acids 157 to 177 (21 residues), see Phobius details PF01595: CNNM" amino acids 45 to 217 (173 residues), 118.8 bits, see alignment E=2.2e-38 PF00571: CBS" amino acids 232 to 287 (56 residues), 19.9 bits, see alignment 7.5e-08 amino acids 302 to 352 (51 residues), 28.2 bits, see alignment 2e-10

Best Hits

KEGG orthology group: None (inferred from 87% identity to kko:Kkor_0120)

Predicted SEED Role

"Hemolysin"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (392 amino acids)

>B158DRAFT_0301 Hemolysins and related proteins containing CBS domains (Kangiella aquimarina DSM 16071)
MKRLFIVATLCLLWMLSIEPAHASAVASDISKVSSIDWALLALYILIAILFSFFCSIAEA
VLLSITPSYIEHMQEKNPKRAKVLRTLRITSVDRSLAAILTLNTIAHTVGAIAAGAQATV
VFGSAWIGLFSVIMTLAILFFSEIVPKTIGAVYWKQLATITAVYVQWLIKILYPLIWLSE
MITKWISHGKKQHIFSRDEFLAMAGLGERTGHIDEHEFRVVRNLFRFRQLRAKDIMTPRT
VMVSLPASAKVKDVFQQVLEIRFSRLPIYSEDNDDITDFVLKDDILMTQAKDHGARTLAH
LKRKLMVVLAEMPLPDLMEVLLNERQHIALVVDEYGQTSGLVTLEDVVETLLGLEIMDEM
DEVKDMQLLARQQWRKRAEKRGLIIDKDSESQ