Protein Info for Atu6077 in Agrobacterium fabrum C58

Annotation: monooxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 495 PF07992: Pyr_redox_2" amino acids 51 to 368 (318 residues), 36 bits, see alignment E=1.1e-12 PF13454: NAD_binding_9" amino acids 54 to 201 (148 residues), 32.5 bits, see alignment E=1.7e-11 PF13434: Lys_Orn_oxgnase" amino acids 134 to 278 (145 residues), 35.4 bits, see alignment E=1.4e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to atu:Atu6077)

Predicted SEED Role

"Nucleoside-diphosphate-sugar epimerases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A2Z2PJT4 at UniProt or InterPro

Protein Sequence (495 amino acids)

>Atu6077 monooxygenase (Agrobacterium fabrum C58)
MTVQQKIASGRSSGRTVSQERLNQLSEQTRRAIAQLEPVTLDWVAPVATDMDVAVIGGGQ
SGVAIAFGLRRAGIRRVQVFDAATPETAGVWNTIARMHTLRAGKGFTGLEQGIPELTFEH
WYVALHGDAAFAAMAEIPRTVWLDYLNWYRETAGIDVRWQHRLISIDPRSDAENAPLNLR
FELQDKGVIDLSTQTIVLATGLDGLGEPYIPSVLSHTLPPDRLVHTNDLINFSSLRGLSV
GVVGAAASAFDAAAVALEHGAASVHQFVRHGDLVEANDQAAARPSADKLFFPEFDDAMRW
RLILERRRRSSAPDAAIARACQHPNHYLHFNVAAEQIVALGDDIVARTTTGDIMLDTVIA
ATGYRQNVYARPELTAAAPHILLWQDRVAAAEGESGWSSHPYLGKGFELQEIEPGSAPWL
KRIHVYTFAAIISHGIHAGDIGSAAIALPRLIAAVARSLFIHARADYERLASLGPSIAVD
RVAPSPVSGPWEAAP